Hdlbp (Rattus norvegicus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSRNOG00000031479 T19453_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000048476 KH 98 143
ENSRNOP00000048476 KH 152 212
ENSRNOP00000048476 KH 224 284
ENSRNOP00000048476 KH 297 357
ENSRNOP00000048476 KH 366 424
ENSRNOP00000048476 KH 437 497
ENSRNOP00000048476 KH 509 570
ENSRNOP00000048476 KH 583 643
ENSRNOP00000048476 KH 655 716
ENSRNOP00000048476 KH 729 790
ENSRNOP00000048476 KH 802 863
ENSRNOP00000048476 KH 875 967
ENSRNOP00000048476 KH 974 1034
ENSRNOP00000048476 KH 1054 1117
ENSRNOP00000048476 KH 1129 1190
ENSRNOP00000049563 KH 98 143
ENSRNOP00000049563 KH 152 212
ENSRNOP00000049563 KH 224 284
ENSRNOP00000049563 KH 297 357
ENSRNOP00000049563 KH 366 397
ENSRNOP00000062518 KH 98 143
ENSRNOP00000062518 KH 152 212
ENSRNOP00000062518 KH 224 284
ENSRNOP00000062518 KH 297 357

Links

Other KH family RBPs
Other Rattus norvegicus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Hdlbp Mus musculus ENSMUSG00000034088 N 0.994
HDLBP Homo sapiens ENSG00000115677 N 0.979
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.979
LOC100057882 Equus caballus ENSECAG00000012829 N 0.978
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.978
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.974
HDLBP Canis familiaris ENSCAFG00000012913 N 0.974
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.974
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.973
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.972
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.971
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.970
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.963
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.951
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.937
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.928
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.926
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.906
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.905
HDLBP Felis catus ENSFCAG00000010455 N 0.898
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.846
AAH44314 Xenopus laevis AAH44314 N 0.835
hdlbp Danio rerio ENSDARG00000009830 N 0.811
HDLBP Sorex araneus ENSSARG00000012639 N 0.806
HDLBP Oryzias latipes ENSORLG00000002226 N 0.803
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.797
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.792
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.789
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.762
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.744
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.736
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.735
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.728