HDLBP (Pteropus vampyrus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSPVAG00000000555 T19393_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000000523 KH 98 143
ENSPVAP00000000523 KH 152 212
ENSPVAP00000000523 KH 224 284
ENSPVAP00000000523 KH 297 357
ENSPVAP00000000523 KH 366 424
ENSPVAP00000000523 KH 437 497
ENSPVAP00000000523 KH 509 570
ENSPVAP00000000523 KH 583 643
ENSPVAP00000000523 KH 655 716
ENSPVAP00000000523 KH 729 790
ENSPVAP00000000523 KH 802 863
ENSPVAP00000000523 KH 875 964
ENSPVAP00000000523 KH 971 1031
ENSPVAP00000000523 KH 1051 1114
ENSPVAP00000000523 KH 1126 1187

Links

Other KH family RBPs
Other Pteropus vampyrus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HDLBP Canis familiaris ENSCAFG00000012913 N 0.958
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.958
LOC100057882 Equus caballus ENSECAG00000012829 N 0.956
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.951
Hdlbp Mus musculus ENSMUSG00000034088 N 0.951
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.950
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.949
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.949
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.948
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.948
HDLBP Homo sapiens ENSG00000115677 N 0.948
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.945
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.942
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.941
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.922
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.914
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.909
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.894
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.893
HDLBP Felis catus ENSFCAG00000010455 N 0.881
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.836
AAH44314 Xenopus laevis AAH44314 N 0.831
HDLBP Sorex araneus ENSSARG00000012639 N 0.800
hdlbp Danio rerio ENSDARG00000009830 N 0.797
HDLBP Oryzias latipes ENSORLG00000002226 N 0.794
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.783
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.783
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.780
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.757
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.740
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.735
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.732
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.729