Hdlbp (Mus musculus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMUSG00000034088 T19134_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000043047 KH 98 143
ENSMUSP00000043047 KH 152 212
ENSMUSP00000043047 KH 224 284
ENSMUSP00000043047 KH 297 357
ENSMUSP00000043047 KH 366 424
ENSMUSP00000043047 KH 437 497
ENSMUSP00000043047 KH 509 570
ENSMUSP00000043047 KH 583 643
ENSMUSP00000043047 KH 655 716
ENSMUSP00000043047 KH 729 790
ENSMUSP00000043047 KH 802 863
ENSMUSP00000043047 KH 875 967
ENSMUSP00000043047 KH 974 1034
ENSMUSP00000043047 KH 1054 1117
ENSMUSP00000043047 KH 1129 1190

Links

Other KH family RBPs
Other Mus musculus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.994
HDLBP Homo sapiens ENSG00000115677 N 0.983
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.983
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.982
LOC100057882 Equus caballus ENSECAG00000012829 N 0.981
HDLBP Canis familiaris ENSCAFG00000012913 N 0.979
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.978
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.975
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.974
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.974
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.972
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.970
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.962
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.951
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.939
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.931
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.929
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.911
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.910
HDLBP Felis catus ENSFCAG00000010455 N 0.902
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.847
AAH44314 Xenopus laevis AAH44314 N 0.836
hdlbp Danio rerio ENSDARG00000009830 N 0.813
HDLBP Sorex araneus ENSSARG00000012639 N 0.808
HDLBP Oryzias latipes ENSORLG00000002226 N 0.803
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.797
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.791
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.787
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.765
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.743
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.735
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.734
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.727