HDLBP (Myotis lucifugus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMLUG00000005628 T19032_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000005161 KH 98 143
ENSMLUP00000005161 KH 152 212
ENSMLUP00000005161 KH 224 284
ENSMLUP00000005161 KH 297 357
ENSMLUP00000005161 KH 366 424
ENSMLUP00000005161 KH 437 497
ENSMLUP00000005161 KH 509 570
ENSMLUP00000005161 KH 583 643
ENSMLUP00000005161 KH 655 716
ENSMLUP00000005161 KH 729 790
ENSMLUP00000005161 KH 802 863
ENSMLUP00000005161 KH 875 919
ENSMLUP00000005161 KH 974 1034
ENSMLUP00000005161 KH 1054 1117
ENSMLUP00000005161 KH 1129 1190

Links

Other KH family RBPs
Other Myotis lucifugus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HDLBP Canis familiaris ENSCAFG00000012913 N 0.931
LOC100057882 Equus caballus ENSECAG00000012829 N 0.931
Hdlbp Mus musculus ENSMUSG00000034088 N 0.931
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.929
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.928
HDLBP Homo sapiens ENSG00000115677 N 0.925
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.925
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.925
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.924
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.920
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.920
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.917
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.916
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.914
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.914
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.893
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.888
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.871
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.871
HDLBP Felis catus ENSFCAG00000010455 N 0.858
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.818
AAH44314 Xenopus laevis AAH44314 N 0.809
hdlbp Danio rerio ENSDARG00000009830 N 0.784
HDLBP Oryzias latipes ENSORLG00000002226 N 0.775
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.767
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.766
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.765
HDLBP Sorex araneus ENSSARG00000012639 N 0.765
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.744
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.721
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.721
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.719
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.710