HNRNPR (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000013308 T35115_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSGALG00000000814
M242_0.6 		Gallus gallus MMAAAWY RNAcompete
Ray et al.(2013)
RNCMPT00288 		0.956
ENSXETG00000007102
M243_0.6 		Xenopus tropicalis MAAAAAG RNAcompete
Ray et al.(2013)
RNCMPT00289 		0.912
ENSXETG00000018075
M236_0.6 		Xenopus tropicalis MAAAWWD RNAcompete
Ray et al.(2013)
RNCMPT00281 		0.843
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000019636 RRM 167 235
ENSCAFP00000019636 RRM 248 319
ENSCAFP00000019636 RRM 347 409

Links

Other RRM family RBPs
Other Canis familiaris RBPs

82 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A3KMV6_BOVIN Bos taurus ENSBTAG00000016578 I 0.980
A7E355_BOVIN Bos taurus ENSBTAG00000006672 I 0.839
AAH70529 Xenopus laevis AAH70529 I 0.844
AAI61702 Xenopus laevis AAI61702 I 0.902
Ame_R001024 Ailuropoda melanoleuca Ame_R001024 I 0.980
Ame_R011496 Ailuropoda melanoleuca Ame_R011496 I 0.839
ENSCJAG00000013031 Callithrix jacchus ENSCJAG00000013031 I 0.883
ENSCPOG00000009653 Cavia porcellus ENSCPOG00000009653 I 0.980
ENSGALG00000000814 Gallus gallus ENSGALG00000000814 D 0.956
ENSPPYG00000001744 Pongo pygmaeus ENSPPYG00000001744 I 0.980
ENSPPYG00000016819 Pongo pygmaeus ENSPPYG00000016819 I 0.839
ENSRNOG00000033356 Rattus norvegicus ENSRNOG00000033356 I 0.782
ENSXETG00000007102 Xenopus tropicalis ENSXETG00000007102 D 0.912
ENSXETG00000018075 Xenopus tropicalis ENSXETG00000018075 D 0.834
HNRNPR Taeniopygia guttata ENSTGUG00000000880 I 0.956
HNRNPR Monodelphis domestica ENSMODG00000016144 I 0.985
HNRNPR Myotis lucifugus ENSMLUG00000007582 I 0.936
HNRNPR Tetraodon nigroviridis ENSTNIG00000017576 I 0.844
HNRNPR Tupaia belangeri ENSTBEG00000002251 I 0.990
Hnrnpr Mus musculus ENSMUSG00000066037 I 0.980
HNRNPR Ornithorhynchus anatinus ENSOANG00000003961 I 0.961
HNRNPR Sorex araneus ENSSARG00000001732 I 0.990
HNRNPR Oryctolagus cuniculus ENSOCUG00000006686 I 1.000
Hnrnpr Rattus norvegicus ENSRNOG00000011910 I 0.980
HNRNPR Otolemur garnettii ENSOGAG00000009179 I 0.975
HNRNPR Ochotona princeps ENSOPRG00000014561 I 0.873
HNRNPR Pteropus vampyrus ENSPVAG00000014804 I 0.990
HNRNPR Procavia capensis ENSPCAG00000010462 I 0.814
HNRNPR Pan troglodytes ENSPTRG00000000324 I 0.990
HNRNPR Meleagris gallopavo ENSMGAG00000001000 I 0.956
HNRNPR Macropus eugenii ENSMEUG00000003769 I 0.814
HNRNPR Tursiops truncatus ENSTTRG00000007752 I 0.912
HNRNPR Homo sapiens ENSG00000125944 I 1.000
HNRNPR Felis catus ENSFCAG00000019123 I 0.754
HNRNPR Erinaceus europaeus ENSEEUG00000010120 I 0.956
HNRNPR Equus caballus ENSECAG00000013733 I 0.980
HNRNPR Gasterosteus aculeatus ENSGACG00000003202 I 0.849
HNRNPR Callithrix jacchus ENSCJAG00000005512 I 0.990
HNRNPR Choloepus hoffmanni ENSCHOG00000005090 I 0.990
HNRNPR Takifugu rubripes ENSTRUG00000008817 I 0.844
HNRNPR Anolis carolinensis ENSACAG00000017593 I 0.971
HNRNPR Macaca mulatta ENSMMUG00000010970 I 0.980
HNRNPR Oryzias latipes ENSORLG00000002515 I 0.844
HNRNPR Loxodonta africana ENSLAFG00000012793 I 0.980
HNRNPR Gorilla gorilla ENSGGOG00000013250 I 1.000
Q5ZLH7_CHICK Gallus gallus ENSGALG00000015830 I 0.834
SYNCRIP Sorex araneus ENSSARG00000005967 I 0.839
SYNCRIP Tetraodon nigroviridis ENSTNIG00000017299 I 0.811
SYNCRIP Tarsius syrichta ENSTSYG00000013305 I 0.839
Syncrip Rattus norvegicus ENSRNOG00000000204 I 0.844
SYNCRIP Takifugu rubripes ENSTRUG00000005365 I 0.811
SYNCRIP Tetraodon nigroviridis ENSTNIG00000002821 I 0.820
SYNCRIP Cavia porcellus ENSCPOG00000012415 I 0.839
SYNCRIP Takifugu rubripes ENSTRUG00000014766 I 0.830
SYNCRIP Vicugna pacos ENSVPAG00000001061 I 0.839
SYNCRIP Sus scrofa ENSSSCG00000004294 I 0.839
SYNCRIP Pteropus vampyrus ENSPVAG00000011888 I 0.839
SYNCRIP Canis familiaris ENSCAFG00000003024 I 0.839
SYNCRIP Loxodonta africana ENSLAFG00000018172 I 0.839
SYNCRIP Gorilla gorilla ENSGGOG00000012898 I 0.839
SYNCRIP Gasterosteus aculeatus ENSGACG00000011665 I 0.839
SYNCRIP Gasterosteus aculeatus ENSGACG00000009124 I 0.820
SYNCRIP Anolis carolinensis ENSACAG00000015234 I 0.829
SYNCRIP Homo sapiens ENSG00000135316 I 0.839
SYNCRIP Echinops telfairi ENSETEG00000020109 I 0.839
Syncrip Dipodomys ordii ENSDORG00000005217 I 0.711
syncrip Danio rerio ENSDARG00000040184 I 0.839
SYNCRIP Callithrix jacchus ENSCJAG00000015352 I 0.839
SYNCRIP Microcebus murinus ENSMICG00000007192 I 0.839
SYNCRIP Myotis lucifugus ENSMLUG00000006919 I 0.839
SYNCRIP Oryzias latipes ENSORLG00000014840 I 0.816
SYNCRIP Oryzias latipes ENSORLG00000009190 I 0.844
SYNCRIP Otolemur garnettii ENSOGAG00000001721 I 0.711
SYNCRIP Oryctolagus cuniculus ENSOCUG00000000601 I 0.839
SYNCRIP Ornithorhynchus anatinus ENSOANG00000010099 I 0.829
SYNCRIP Meleagris gallopavo ENSMGAG00000013690 I 0.834
Syncrip Mus musculus ENSMUSG00000032423 I 0.844
SYNCRIP Macaca mulatta ENSMMUG00000012575 I 0.839
syncripl Danio rerio ENSDARG00000026723 I 0.811
XM_001362737.1 Monodelphis domestica ENSMODG00000000609 I 0.839
XM_001366708.1 Monodelphis domestica ENSMODG00000018345 I 0.839
XR_022081.1 Pan troglodytes ENSPTRG00000018393 I 0.839