SRSF12 (Ochotona princeps)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOPRG00000016052 T40052_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.722
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.722
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.722
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.722
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000014655 RRM 1 60

Links

Other RRM family RBPs
Other Ochotona princeps RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH84231 Xenopus laevis AAH84231 I 0.764
Ame_R010918 Ailuropoda melanoleuca Ame_R010918 I 0.952
CR293507.1 Danio rerio ENSDARG00000022415 I 0.736
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.722
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.712
ENSCJAG00000002933 Callithrix jacchus ENSCJAG00000002933 I 0.790
ENSCJAG00000010608 Callithrix jacchus ENSCJAG00000010608 I 0.700
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.712
ENSECAG00000023709 Equus caballus ENSECAG00000023709 I 0.839
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.722
ENSFCAG00000002888 Felis catus ENSFCAG00000002888 I 0.855
ENSGACG00000002231 Gasterosteus aculeatus ENSGACG00000002231 I 0.740
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.712
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.712
ENSMGAG00000005772 Meleagris gallopavo ENSMGAG00000005772 I 0.839
ENSMICG00000000520 Microcebus murinus ENSMICG00000000520 I 0.812
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.722
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.722
ENSSTOG00000000956 Spermophilus tridecemlineatus ENSSTOG00000000956 I 0.852
ENSTBEG00000008665 Tupaia belangeri ENSTBEG00000008665 I 0.885
ENSTBEG00000015120 Tupaia belangeri ENSTBEG00000015120 I 0.967
ENSTSYG00000009439 Tarsius syrichta ENSTSYG00000009439 I 0.823
LOC100070965 Equus caballus ENSECAG00000019135 I 0.952
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.792
Srrp Rattus norvegicus ENSRNOG00000024247 I 0.778
SRSF10 Takifugu rubripes ENSTRUG00000006317 I 0.740
SRSF10 Oryzias latipes ENSORLG00000007691 I 0.736
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.819
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.720
SRSF12 Sorex araneus ENSSARG00000007795 I 0.967
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.819
SRSF12 Spermophilus tridecemlineatus ENSSTOG00000007170 I 0.951
SRSF12 Tarsius syrichta ENSTSYG00000001269 I 0.951
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.819
SRSF12 Pteropus vampyrus ENSPVAG00000001046 I 0.967
SRSF12 Pan troglodytes ENSPTRG00000018415 I 0.819
SRSF12 Cavia porcellus ENSCPOG00000010917 I 0.952
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.819
SRSF12 Echinops telfairi ENSETEG00000001386 I 0.918
SRSF12 Homo sapiens ENSG00000154548 I 0.819
SRSF12 Gorilla gorilla ENSGGOG00000024850 I 0.952
SRSF12 Loxodonta africana ENSLAFG00000005458 I 0.952
SRSF12 Myotis lucifugus ENSMLUG00000001545 I 0.967
SRSF12 Macaca mulatta ENSMMUG00000014941 I 0.819
SRSF12 Monodelphis domestica ENSMODG00000018282 I 0.806
Srsf12 Mus musculus ENSMUSG00000054679 I 0.778
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.843
SRSF12 Otolemur garnettii ENSOGAG00000006421 I 0.967
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.819
SRSF12 Choloepus hoffmanni ENSCHOG00000013911 I 0.894
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.722