ENSECAG00000023709 (Equus caballus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSECAG00000023709 T36712_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.822
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.822
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.822
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.822
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000021188 RRM 1 62

Links

Other RRM family RBPs
Other Equus caballus RBPs

76 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSMGAG00000005772 Meleagris gallopavo ENSMGAG00000005772 I 0.984
ENSSTOG00000000956 Spermophilus tridecemlineatus ENSSTOG00000000956 I 0.952
ENSMICG00000000520 Microcebus murinus ENSMICG00000000520 I 0.922
ENSTSYG00000009439 Tarsius syrichta ENSTSYG00000009439 I 0.921
ENSCJAG00000002933 Callithrix jacchus ENSCJAG00000002933 I 0.903
ENSFCAG00000002888 Felis catus ENSFCAG00000002888 I 0.889
LOC100070965 Equus caballus ENSECAG00000019135 I 0.871
SRSF12 Loxodonta africana ENSLAFG00000005458 I 0.871
SRSF12 Gorilla gorilla ENSGGOG00000024850 I 0.871
Ame_R010918 Ailuropoda melanoleuca Ame_R010918 I 0.871
SRSF12 Cavia porcellus ENSCPOG00000010917 I 0.871
ENSTBEG00000015120 Tupaia belangeri ENSTBEG00000015120 I 0.855
SRSF12 Tarsius syrichta ENSTSYG00000001269 I 0.855
SRSF12 Myotis lucifugus ENSMLUG00000001545 I 0.855
SRSF12 Echinops telfairi ENSETEG00000001386 I 0.855
SRSF12 Sorex araneus ENSSARG00000007795 I 0.855
SRSF12 Spermophilus tridecemlineatus ENSSTOG00000007170 I 0.855
SRSF12 Pteropus vampyrus ENSPVAG00000001046 I 0.855
SRSF12 Otolemur garnettii ENSOGAG00000006421 I 0.855
ENSTBEG00000008665 Tupaia belangeri ENSTBEG00000008665 I 0.839
SRSF12 Ochotona princeps ENSOPRG00000016052 I 0.839
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.836
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.836
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.836
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.836
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.833
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.833
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.833
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.833
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.833
SRSF12 Choloepus hoffmanni ENSCHOG00000013911 I 0.818
ENSCJAG00000010608 Callithrix jacchus ENSCJAG00000010608 I 0.814
ENSCHOG00000007773 Choloepus hoffmanni ENSCHOG00000007773 I 0.808
LOC100387136 Callithrix jacchus ENSCJAG00000020883 I 0.808
ENSCHOG00000004836 Choloepus hoffmanni ENSCHOG00000004836 I 0.808
Q3ZBU5_BOVIN Bos taurus ENSBTAG00000008072 I 0.808
ENSTTRG00000016150 Tursiops truncatus ENSTTRG00000016150 I 0.808
ENSPVAG00000013611 Pteropus vampyrus ENSPVAG00000013611 I 0.808
ENSPCAG00000004059 Procavia capensis ENSPCAG00000004059 I 0.808
ENSMICG00000017029 Microcebus murinus ENSMICG00000017029 I 0.808
ENSMMUG00000013784 Macaca mulatta ENSMMUG00000013784 I 0.808
Srsf10 Mus musculus ENSMUSG00000028676 I 0.808
ENSOPRG00000018613 Ochotona princeps ENSOPRG00000018613 I 0.808
BX511012.1 Homo sapiens ENSG00000215699 I 0.808
XR_020461.1 Pan troglodytes ENSPTRG00000024234 I 0.808
Fusip1 Homo sapiens ENSG00000188529 D 0.808
ENSOCUG00000024013 Oryctolagus cuniculus ENSOCUG00000024013 I 0.808
Srsf10 Dipodomys ordii ENSDORG00000009136 I 0.795
ENSCJAG00000021801 Callithrix jacchus ENSCJAG00000021801 I 0.792
AAH46695 Xenopus laevis AAH46695 I 0.792
Q5ZMR4_CHICK Gallus gallus ENSGALG00000004133 I 0.781
ENSOCUG00000021782 Oryctolagus cuniculus ENSOCUG00000021782 I 0.781
XM_547294.2 Canis familiaris ENSCAFG00000003095 I 0.781
FUSIP1 Taeniopygia guttata ENSTGUG00000001178 I 0.778
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.771
CR293507.1 Danio rerio ENSDARG00000022415 I 0.764
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.764
SRSF12 Homo sapiens ENSG00000154548 I 0.764
SRSF10 Oryzias latipes ENSORLG00000007691 I 0.750
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.750
SRSF12 Pan troglodytes ENSPTRG00000018415 I 0.750
SRSF12 Macaca mulatta ENSMMUG00000014941 I 0.750
Srrp Rattus norvegicus ENSRNOG00000024247 I 0.750
AAH84231 Xenopus laevis AAH84231 I 0.750
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.750
ENSACAG00000005327 Anolis carolinensis ENSACAG00000005327 I 0.750
Srsf12 Mus musculus ENSMUSG00000054679 I 0.750
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.750
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.750
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.750
SRSF10 Takifugu rubripes ENSTRUG00000006317 I 0.740
ENSGACG00000002231 Gasterosteus aculeatus ENSGACG00000002231 I 0.740
SRSF12 Monodelphis domestica ENSMODG00000018282 I 0.736
ENSCJAG00000007019 Callithrix jacchus ENSCJAG00000007019 I 0.736
SLC9A1 Tetraodon nigroviridis ENSTNIG00000005725 I 0.712
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.707