ENSTSYG00000009439 (Tarsius syrichta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTSYG00000009439 T42478_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.845
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.845
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.845
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.845
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTSYP00000008628 RRM 1 60

Links

Other RRM family RBPs
Other Tarsius syrichta RBPs

75 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSMGAG00000005772 Meleagris gallopavo ENSMGAG00000005772 I 0.984
ENSFCAG00000002888 Felis catus ENSFCAG00000002888 I 0.967
ENSECAG00000023709 Equus caballus ENSECAG00000023709 I 0.921
ENSSTOG00000000956 Spermophilus tridecemlineatus ENSSTOG00000000956 I 0.919
ENSMICG00000000520 Microcebus murinus ENSMICG00000000520 I 0.877
ENSCJAG00000002933 Callithrix jacchus ENSCJAG00000002933 I 0.871
SRSF12 Echinops telfairi ENSETEG00000001386 I 0.869
ENSTBEG00000008665 Tupaia belangeri ENSTBEG00000008665 I 0.852
ENSOCUG00000024013 Oryctolagus cuniculus ENSOCUG00000024013 I 0.845
BX511012.1 Homo sapiens ENSG00000215699 I 0.845
ENSOPRG00000018613 Ochotona princeps ENSOPRG00000018613 I 0.845
Srsf10 Mus musculus ENSMUSG00000028676 I 0.845
ENSMMUG00000013784 Macaca mulatta ENSMMUG00000013784 I 0.845
LOC100387136 Callithrix jacchus ENSCJAG00000020883 I 0.845
ENSMICG00000017029 Microcebus murinus ENSMICG00000017029 I 0.845
Fusip1 Homo sapiens ENSG00000188529 D 0.845
Srsf10 Dipodomys ordii ENSDORG00000009136 I 0.845
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.845
ENSPCAG00000004059 Procavia capensis ENSPCAG00000004059 I 0.845
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.845
Q3ZBU5_BOVIN Bos taurus ENSBTAG00000008072 I 0.845
ENSTTRG00000016150 Tursiops truncatus ENSTTRG00000016150 I 0.845
ENSCHOG00000004836 Choloepus hoffmanni ENSCHOG00000004836 I 0.845
ENSPVAG00000013611 Pteropus vampyrus ENSPVAG00000013611 I 0.845
ENSCHOG00000007773 Choloepus hoffmanni ENSCHOG00000007773 I 0.845
XR_020461.1 Pan troglodytes ENSPTRG00000024234 I 0.845
ENSTBEG00000015120 Tupaia belangeri ENSTBEG00000015120 I 0.839
SRSF12 Tarsius syrichta ENSTSYG00000001269 I 0.839
SRSF12 Spermophilus tridecemlineatus ENSSTOG00000007170 I 0.839
SRSF12 Otolemur garnettii ENSOGAG00000006421 I 0.839
SRSF12 Pteropus vampyrus ENSPVAG00000001046 I 0.839
SRSF12 Myotis lucifugus ENSMLUG00000001545 I 0.839
SRSF12 Sorex araneus ENSSARG00000007795 I 0.839
SRSF12 Gorilla gorilla ENSGGOG00000024850 I 0.825
SRSF12 Loxodonta africana ENSLAFG00000005458 I 0.825
LOC100070965 Equus caballus ENSECAG00000019135 I 0.825
Ame_R010918 Ailuropoda melanoleuca Ame_R010918 I 0.825
SRSF12 Cavia porcellus ENSCPOG00000010917 I 0.825
SRSF12 Ochotona princeps ENSOPRG00000016052 I 0.823
XM_547294.2 Canis familiaris ENSCAFG00000003095 I 0.817
ENSOCUG00000021782 Oryctolagus cuniculus ENSOCUG00000021782 I 0.817
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.808
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.808
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.808
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.808
Q5ZMR4_CHICK Gallus gallus ENSGALG00000004133 I 0.803
ENSCJAG00000010608 Callithrix jacchus ENSCJAG00000010608 I 0.800
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.781
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.781
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.781
AAH46695 Xenopus laevis AAH46695 I 0.778
ENSCJAG00000021801 Callithrix jacchus ENSCJAG00000021801 I 0.778
SRSF12 Choloepus hoffmanni ENSCHOG00000013911 I 0.776
FUSIP1 Taeniopygia guttata ENSTGUG00000001178 I 0.753
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.750
SRSF12 Homo sapiens ENSG00000154548 I 0.750
AAH84231 Xenopus laevis AAH84231 I 0.736
Srrp Rattus norvegicus ENSRNOG00000024247 I 0.736
Srsf12 Mus musculus ENSMUSG00000054679 I 0.736
SRSF10 Oryzias latipes ENSORLG00000007691 I 0.736
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.732
SLC9A1 Tetraodon nigroviridis ENSTNIG00000005725 I 0.732
SRSF10 Takifugu rubripes ENSTRUG00000006317 I 0.726
ENSGACG00000002231 Gasterosteus aculeatus ENSGACG00000002231 I 0.726
CR293507.1 Danio rerio ENSDARG00000022415 I 0.726
ENSACAG00000005327 Anolis carolinensis ENSACAG00000005327 I 0.722
ENSCJAG00000007019 Callithrix jacchus ENSCJAG00000007019 I 0.722
SRSF12 Pan troglodytes ENSPTRG00000018415 I 0.712
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.712
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.712
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.712
SRSF12 Macaca mulatta ENSMMUG00000014941 I 0.712
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.712
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.712
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.707