Ame_R010918 (Ailuropoda melanoleuca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Ame_R010918 T55581_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.750
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.750
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.750
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.750
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Ame_R010918 RRM 1 62

Links

Other RRM family RBPs
Other Ailuropoda melanoleuca RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SRSF12 Cavia porcellus ENSCPOG00000010917 I 1.000
SRSF12 Gorilla gorilla ENSGGOG00000024850 I 1.000
LOC100070965 Equus caballus ENSECAG00000019135 I 1.000
SRSF12 Loxodonta africana ENSLAFG00000005458 I 0.984
SRSF12 Otolemur garnettii ENSOGAG00000006421 I 0.984
SRSF12 Pteropus vampyrus ENSPVAG00000001046 I 0.984
SRSF12 Sorex araneus ENSSARG00000007795 I 0.984
SRSF12 Myotis lucifugus ENSMLUG00000001545 I 0.984
ENSTBEG00000015120 Tupaia belangeri ENSTBEG00000015120 I 0.984
SRSF12 Tarsius syrichta ENSTSYG00000001269 I 0.968
SRSF12 Spermophilus tridecemlineatus ENSSTOG00000007170 I 0.968
SRSF12 Ochotona princeps ENSOPRG00000016052 I 0.952
SRSF12 Choloepus hoffmanni ENSCHOG00000013911 I 0.939
SRSF12 Echinops telfairi ENSETEG00000001386 I 0.919
ENSTBEG00000008665 Tupaia belangeri ENSTBEG00000008665 I 0.887
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.886
ENSECAG00000023709 Equus caballus ENSECAG00000023709 I 0.871
ENSMGAG00000005772 Meleagris gallopavo ENSMGAG00000005772 I 0.871
SRSF12 Macaca mulatta ENSMMUG00000014941 I 0.861
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.861
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.861
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.861
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.861
SRSF12 Homo sapiens ENSG00000154548 I 0.861
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.861
SRSF12 Pan troglodytes ENSPTRG00000018415 I 0.861
ENSFCAG00000002888 Felis catus ENSFCAG00000002888 I 0.857
ENSSTOG00000000956 Spermophilus tridecemlineatus ENSSTOG00000000956 I 0.855
SRSF12 Monodelphis domestica ENSMODG00000018282 I 0.847
ENSMICG00000000520 Microcebus murinus ENSMICG00000000520 I 0.828
ENSTSYG00000009439 Tarsius syrichta ENSTSYG00000009439 I 0.825
ENSCJAG00000002933 Callithrix jacchus ENSCJAG00000002933 I 0.823
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.819
Srsf12 Mus musculus ENSMUSG00000054679 I 0.806
Srrp Rattus norvegicus ENSRNOG00000024247 I 0.806
AAH84231 Xenopus laevis AAH84231 I 0.792
SRSF10 Takifugu rubripes ENSTRUG00000006317 I 0.767
ENSGACG00000002231 Gasterosteus aculeatus ENSGACG00000002231 I 0.767
SRSF10 Oryzias latipes ENSORLG00000007691 I 0.764
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.764
CR293507.1 Danio rerio ENSDARG00000022415 I 0.764
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.750
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.750
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.750
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.750
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.747
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.740
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.740
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.740
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.740
ENSCJAG00000010608 Callithrix jacchus ENSCJAG00000010608 I 0.729
SLC9A1 Tetraodon nigroviridis ENSTNIG00000005725 I 0.726
ENSTTRG00000016150 Tursiops truncatus ENSTTRG00000016150 I 0.726
ENSPVAG00000013611 Pteropus vampyrus ENSPVAG00000013611 I 0.726
ENSMMUG00000013784 Macaca mulatta ENSMMUG00000013784 I 0.726
XR_020461.1 Pan troglodytes ENSPTRG00000024234 I 0.726
ENSCHOG00000004836 Choloepus hoffmanni ENSCHOG00000004836 I 0.726
BX511012.1 Homo sapiens ENSG00000215699 I 0.726
Fusip1 Homo sapiens ENSG00000188529 D 0.726
ENSCHOG00000007773 Choloepus hoffmanni ENSCHOG00000007773 I 0.726
ENSMICG00000017029 Microcebus murinus ENSMICG00000017029 I 0.726
Q3ZBU5_BOVIN Bos taurus ENSBTAG00000008072 I 0.726
ENSPCAG00000004059 Procavia capensis ENSPCAG00000004059 I 0.726
ENSOPRG00000018613 Ochotona princeps ENSOPRG00000018613 I 0.726
ENSOCUG00000024013 Oryctolagus cuniculus ENSOCUG00000024013 I 0.726
Srsf10 Mus musculus ENSMUSG00000028676 I 0.726
LOC100387136 Callithrix jacchus ENSCJAG00000020883 I 0.726
FUSIP1 Taeniopygia guttata ENSTGUG00000001178 I 0.722
ENSCJAG00000021801 Callithrix jacchus ENSCJAG00000021801 I 0.722
Q5ZMR4_CHICK Gallus gallus ENSGALG00000004133 I 0.712
Srsf10 Dipodomys ordii ENSDORG00000009136 I 0.712
AAH46695 Xenopus laevis AAH46695 I 0.708