LOC690911 (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000033556 T41225_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000043244 RRM 8 74
ENSRNOP00000043244 RRM 339 409
ENSRNOP00000043244 RRM 442 509
ENSRNOP00000043244 RRM 521 585
ENSRNOP00000052647 RRM 8 74
ENSRNOP00000052647 RRM 337 407
ENSRNOP00000052647 RRM 440 507
ENSRNOP00000052647 RRM 519 583
ENSRNOP00000052649 RRM 8 74
ENSRNOP00000052649 RRM 339 409
ENSRNOP00000052649 RRM 442 509
ENSRNOP00000052649 RRM 521 585
ENSRNOP00000059120 RRM 8 74
ENSRNOP00000059120 RRM 339 409
ENSRNOP00000059120 RRM 442 509
ENSRNOP00000059120 RRM 521 585

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R009637 Ailuropoda melanoleuca Ame_R009637 N 0.915
ENSPPYG00000001834 Pongo pygmaeus ENSPPYG00000001834 N 0.985
LOC100053790 Equus caballus ENSECAG00000008833 N 0.915
SPEN Ochotona princeps ENSOPRG00000015800 N 0.904
SPEN Oryctolagus cuniculus ENSOCUG00000010840 N 0.867
SPEN Ornithorhynchus anatinus ENSOANG00000004165 N 0.772
Spen Mus musculus ENSMUSG00000040761 N 0.989
SPEN Pteropus vampyrus ENSPVAG00000013794 N 0.982
SPEN Oryzias latipes ENSORLG00000018414 N 0.882
SPEN Spermophilus tridecemlineatus ENSSTOG00000005637 N 0.852
SPEN Tupaia belangeri ENSTBEG00000003628 N 0.926
SPEN Tetraodon nigroviridis ENSTNIG00000010907 N 0.908
SPEN Tetraodon nigroviridis ENSTNIG00000014666 N 0.886
SPEN Takifugu rubripes ENSTRUG00000001017 N 0.911
SPEN Takifugu rubripes ENSTRUG00000011123 N 0.878
SPEN Tarsius syrichta ENSTSYG00000007170 N 0.900
SPEN Tursiops truncatus ENSTTRG00000015704 N 0.882
SPEN Monodelphis domestica ENSMODG00000003411 N 0.886
SPEN Macaca mulatta ENSMMUG00000008026 N 0.978
SPEN Bos taurus ENSBTAG00000018729 N 0.989
SPEN Canis familiaris ENSCAFG00000016132 N 0.871
SPEN Callithrix jacchus ENSCJAG00000008527 N 0.989
SPEN Cavia porcellus ENSCPOG00000014036 N 0.871
spen Danio rerio ENSDARG00000074245 N 0.819
SPEN Danio rerio ENSDARG00000074332 N 0.878
SPEN Erinaceus europaeus ENSEEUG00000010255 N 0.852
SPEN Homo sapiens ENSG00000065526 N 0.985
SPEN Gasterosteus aculeatus ENSGACG00000001176 N 0.886
SPEN Gasterosteus aculeatus ENSGACG00000005341 N 0.908
SPEN Gallus gallus ENSGALG00000003662 N 0.970
SPEN Gorilla gorilla ENSGGOG00000012041 N 0.985
SPEN Loxodonta africana ENSLAFG00000004524 N 0.911
SPEN Macropus eugenii ENSMEUG00000002422 N 0.745
SPEN Meleagris gallopavo ENSMGAG00000005180 N 0.970
SPEN Myotis lucifugus ENSMLUG00000010144 N 0.779
SPEN Anolis carolinensis ENSACAG00000013761 N 0.889
XR_024490.1 Pan troglodytes ENSPTRG00000000210 N 0.941