gw1.462.53.1 (Capitella teleta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.462.53.1 T53276_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.462.53.1 RRM 33 103

Links

Other RRM family RBPs
Other Capitella teleta RBPs

116 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
145168 Helobdella robusta 145168 N 0.761
AAEL002461 Aedes aegypti AAEL002461 N 0.718
AAH56844 Xenopus laevis AAH56844 N 0.703
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.704
AGAP000977 Anopheles gambiae AGAP000977 N 0.803
Ame_R006638 Ailuropoda melanoleuca Ame_R006638 N 0.806
An07g05140 Aspergillus niger CADANGAG00005786 N 0.704
Aqu1.200557 Amphimedon queenslandica Aqu1.200557 N 0.775
Aqu1.228439 Amphimedon queenslandica Aqu1.228439 N 0.775
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.732
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.704
Bm1_02690 Brugia malayi Bm1_02690 N 0.775
C30B5.4 Caenorhabditis elegans C30B5.4 N 0.718
CAOG_00327 Capsaspora owczarzaki CAOG_00327 N 0.718
CBG02589 Caenorhabditis briggsae CBG02589 N 0.704
CBN24057 Caenorhabditis brenneri CBN24057 N 0.718
CG10466 Drosophila melanogaster FBgn0032822 N 0.789
CRE26315 Caenorhabditis remanei CRE26315 N 0.718
DGIL_AUG5s13597g2t1 Acyrtosiphon pisum DGIL_AUG5s13597g2t1 N 0.718
ENSCSAVG00000001047 Ciona savignyi ENSCSAVG00000001047 N 0.789
ENSGGOG00000016146 Gorilla gorilla ENSGGOG00000016146 N 0.792
ENSGGOG00000026106 Gorilla gorilla ENSGGOG00000026106 N 0.778
ENSLAFG00000028277 Loxodonta africana ENSLAFG00000028277 N 0.775
ENSMLUG00000010298 Myotis lucifugus ENSMLUG00000010298 N 0.806
ENSMLUG00000017095 Myotis lucifugus ENSMLUG00000017095 N 0.817
ENSMMUG00000001001 Macaca mulatta ENSMMUG00000001001 N 0.736
ENSMODG00000011981 Monodelphis domestica ENSMODG00000011981 N 0.704
ENSMODG00000019800 Monodelphis domestica ENSMODG00000019800 N 0.806
ENSOCUG00000020937 Oryctolagus cuniculus ENSOCUG00000020937 N 0.730
ENSOGAG00000006237 Otolemur garnettii ENSOGAG00000006237 N 0.806
ENSOGAG00000009060 Otolemur garnettii ENSOGAG00000009060 N 0.778
ENSPPYG00000020717 Pongo pygmaeus ENSPPYG00000020717 N 0.792
estExtDG_fgenesh_newKGs_kg.C_2300001 Emiliania huxleyi estExtDG_fgenesh_newKGs_kg.C_2300001 N 0.718
estExtDG_fgenesh_newKGs_kg.C_80246 Emiliania huxleyi estExtDG_fgenesh_newKGs_kg.C_80246 N 0.718
estExtDG_Genewise1.C_160043 Emiliania huxleyi estExtDG_Genewise1.C_160043 N 0.718
estExt_fgenesh1_pg.C_30395 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_30395 N 0.732
estExt_fgenesh1_pg.C_410012 Monosiga brevicollis estExt_fgenesh1_pg.C_410012 N 0.732
estExt_fgenesh2_kg.C_140042 Agaricus bisporus estExt_fgenesh2_kg.C_140042 N 0.718
estExt_fgenesh2_pg.C_1800064 Branchiostoma floridae estExt_fgenesh2_pg.C_1800064 N 0.761
estExt_fgenesh3_pg.C_500008 Postia placenta estExt_fgenesh3_pg.C_500008 N 0.704
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.704
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.746
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.704
e_gw1.98.15.1 Volvox carteri e_gw1.98.15.1 N 0.761
fgenesh2_pg.C_sca_10000115 Lottia gigantea fgenesh2_pg.C_sca_10000115 N 0.789
GA10331-RA Drosophila pseudoobscura FBgn0070389 N 0.732
GD24233 Drosophila simulans FBgn0195582 N 0.789
GE13281 Drosophila yakuba FBgn0230967 N 0.789
GF14433 Drosophila ananassae FBgn0091460 N 0.746
GG21207 Drosophila erecta FBgn0113387 N 0.789
GH13830 Drosophila grimshawi FBgn0121306 N 0.746
GI11259 Drosophila mojavensis FBgn0134020 N 0.732
GI11260 Drosophila mojavensis FBgn0134021 N 0.732
GI20215 Drosophila mojavensis FBgn0142951 N 0.732
GJ13600 Drosophila virilis FBgn0200822 N 0.746
GK14925 Drosophila willistoni FBgn0216930 N 0.775
GL26176 Drosophila persimilis FBgn0163758 N 0.732
GM17378 Drosophila sechellia FBgn0172288 N 0.789
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.746
gw.130.169.1 Nematostella vectensis gw.130.169.1 N 0.775
gw1.1.2244.1 Trichoplax adhaerens gw1.1.2244.1 N 0.718
gw1.1.2440.1 Mucor circinelloides gw1.1.2440.1 N 0.789
gw1.1.3012.1 Tremella mesenterica gw1.1.3012.1 N 0.704
gw1.1.945.1 Micromonas pusilla gw1.1.945.1 N 0.732
gw1.39.43.1 Selaginella moellendorfii gw1.39.43.1 N 0.704
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.704
LOAG_03303 Loa loa LOAG_03303 N 0.730
LOC100058600 Equus caballus ENSECAG00000008257 N 0.806
LOC100388331 Callithrix jacchus ENSCJAG00000002436 N 0.806
LOC534630 Bos taurus ENSBTAG00000006252 N 0.746
LOC613705 Bos taurus ENSBTAG00000014771 N 0.746
nasonia_NCBI_hmm382923 Nasonia vitripennis nasonia_NCBI_hmm382923 N 0.831
NCU02467 Neurospora crassa NCU02467 N 0.704
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.718
Pa_1_22200 Podospora anserina Pa_1_22200 N 0.704
PHUM617480 Pediculus humanus PHUM617480 N 0.817
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.718
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.732
RBMX2 Macaca mulatta ENSMMUG00000008389 N 0.806
RBMX2 Pteropus vampyrus ENSPVAG00000004425 N 0.806
RBMX2 Takifugu rubripes ENSTRUG00000001699 N 0.817
RBMX2 Oryctolagus cuniculus ENSOCUG00000011809 N 0.795
RBMX2 Ornithorhynchus anatinus ENSOANG00000001362 N 0.784
Rbmx2 Mus musculus ENSMUSG00000031107 N 0.792
rbmx2 Danio rerio ENSDARG00000044380 N 0.817
RBMX2 Erinaceus europaeus ENSEEUG00000000839 N 0.778
RBMX2 Echinops telfairi ENSETEG00000001763 N 0.806
RBMX2 Homo sapiens ENSG00000134597 N 0.806
RBMX2 Microcebus murinus ENSMICG00000015139 N 0.806
RBMX2 Meleagris gallopavo ENSMGAG00000001801 N 0.792
RBMX2 Macropus eugenii ENSMEUG00000010913 N 0.806
RBMX2 Gasterosteus aculeatus ENSGACG00000001855 N 0.803
RBMX2 Loxodonta africana ENSLAFG00000017625 N 0.770
RBMX2 Gallus gallus ENSGALG00000004025 N 0.806
RBMX2 Cavia porcellus ENSCPOG00000006640 N 0.819
RBMX2 Canis familiaris ENSCAFG00000018770 N 0.784
RBMX2 Anolis carolinensis ENSACAG00000008819 N 0.806
RBMX2 Tursiops truncatus ENSTTRG00000016210 N 0.806
RBMX2 Tarsius syrichta ENSTSYG00000010611 N 0.732
RBMX2 Tetraodon nigroviridis ENSTNIG00000007672 N 0.803
RBMX2 Taeniopygia guttata ENSTGUG00000005239 N 0.708
RBMX2 Spermophilus tridecemlineatus ENSSTOG00000015391 N 0.806
RBMX2 Sorex araneus ENSSARG00000007350 N 0.803
RBMX2 Oryzias latipes ENSORLG00000013183 N 0.817
RBMX2 Procavia capensis ENSPCAG00000012903 N 0.778
Rbmx2 Rattus norvegicus ENSRNOG00000007371 N 0.792
RBMX2 Gorilla gorilla ENSGGOG00000023687 N 0.806
Sjc_0109550 Schistosoma japonicum Sjc_0109550 N 0.743
Smp_170230 Schistosoma mansoni Smp_170230 N 0.743
WUBG_13107 Wuchereria bancrofti WUBG_13107 N 0.775
XM_001377711.1 Monodelphis domestica ENSMODG00000012002 N 0.819
XP_001110036.1 Macaca mulatta ENSMMUG00000020845 N 0.792
XP_001180915.1 Strongylocentrotus purpuratus XP_001180915.1 N 0.746
XP_002164481.1 Hydra magnipapillata XP_002164481.1 N 0.789
XP_791635.2 Strongylocentrotus purpuratus XP_791635.2 N 0.746
XR_023755.1 Pan troglodytes ENSPTRG00000022269 N 0.792