MDP0000286821 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000286821 T57576_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000286821 RRM 34 104
MDP0000286821 RRM 122 191
MDP0000286821 RRM 213 282
MDP0000286821 RRM 317 386

Links

Other RRM family RBPs
Other Malus x domestica RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
28644.m000904 Ricinus communis 28644.m000904 N 0.726
29801.m003152 Ricinus communis 29801.m003152 N 0.712
30170.m013847 Ricinus communis 30170.m013847 N 0.701
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.719
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.715
B9GT62_POPTR Populus trichocarpa POPTR_0002s06340 N 0.712
B9H7X9_POPTR Populus trichocarpa POPTR_0005s22040 N 0.730
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.712
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.722
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.726
cassava31766.valid.m1 Manihot esculenta cassava31766.valid.m1 N 0.758
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.701
Cucsa.364050 Cucumis sativus Cucsa.364050 N 0.722
Glyma02g08480.1 Glycine max Glyma02g08480.1 N 0.719
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.712
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.722
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.712
Glyma16g27670.1 Glycine max Glyma16g27670.1 N 0.744
Glyma20g31120.1 Glycine max Glyma20g31120.1 N 0.754
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.712
GSVIVG00013699001 Vitis vinifera GSVIVG00013699001 N 0.762
MDP0000156895 Malus x domestica MDP0000156895 N 0.719
MDP0000212007 Malus x domestica MDP0000212007 N 0.957
MDP0000224417 Malus x domestica MDP0000224417 N 0.781
MDP0000253709 Malus x domestica MDP0000253709 N 0.719
MDP0000497543 Malus x domestica MDP0000497543 N 0.719
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.701
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.719
PK02172.1 Cannabis sativa PK02172.1 N 0.708
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.722
ppa002584m Prunus persica ppa002584m N 0.847
ppa002607m Prunus persica ppa002607m N 0.708
ppa002618m Prunus persica ppa002618m N 0.715
ppa002620m Prunus persica ppa002620m N 0.715