ENSMODG00000020653 (Monodelphis domestica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMODG00000020653 T19112_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.767
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.735
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.730
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.730
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000025839 KH 15 75
ENSMODP00000025839 KH 103 162
ENSMODP00000025839 KH 250 311

Links

Other KH family RBPs
Other Monodelphis domestica RBPs

75 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.000
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.000
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.730
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.767
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.704
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.000
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.000
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.000
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.767
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.730
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.000
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.000
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.720
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.757
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.725
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.704
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.762
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.714
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.767
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.714
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.767
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.704
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.730
pcbp3 Danio rerio ENSDARG00000054378 I 0.000
pcbp2 Danio rerio ENSDARG00000013184 D 0.735
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.767
PCBP3 Echinops telfairi ENSETEG00000015988 I 0.000
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.711
PCBP2 Equus caballus ENSECAG00000022389 I 0.767
LOC100050101 Equus caballus ENSECAG00000012413 I 0.704
LOC100050579 Equus caballus ENSECAG00000002544 I 0.730
PCBP3 Felis catus ENSFCAG00000014812 I 0.000
PCBP3 Gallus gallus ENSGALG00000013155 I 0.704
PCBP3 Gallus gallus ENSGALG00000004394 I 0.000
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.725
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.000
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.725
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.000
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.704
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.709
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.704
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.767
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.730
PCBP1 Homo sapiens ENSG00000169564 D 0.730
PCBP2 Homo sapiens ENSG00000197111 D 0.767
PCBP3 Homo sapiens ENSG00000183570 I 0.704
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.000
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.767
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.767
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.704
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.000
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.000
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.000
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.704
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.767
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.000
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.767
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.725
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.704
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.730
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.767
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.000
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.730
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.767
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.000
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.730
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.767
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.704
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.000
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.735
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.735
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.000
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.000
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.704
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.730
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.767
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.767
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.730
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.767
PCBP3 Procavia capensis ENSPCAG00000001454 I 0.000
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.767
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.000
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.730
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.000
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.704
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.000
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.767
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.704
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.000
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.000
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.704
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.730
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.735
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.000
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.704
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.720
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.704
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.000
PCBP3 Tetraodon nigroviridis ENSTNIG00000008872 I 0.000
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.730
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.767
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.704
AAH41241 Xenopus laevis AAH41241 I 0.751
AAH84195 Xenopus laevis AAH84195 I 0.751
CAB50743 Xenopus laevis CAB50743 I 0.751
CAD29864 Xenopus laevis CAD29864 I 0.751
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.751