BRADI4G38260 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI4G38260 T33297_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G38260.1 RRM 119 189
BRADI4G38260.1 RRM 214 283
BRADI4G38260.2 RRM 119 189
BRADI4G38260.2 RRM 214 284

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL002308 Aedes aegypti AAEL002308 I 0.000
e_gw1.1.2331.1 Agaricus bisporus e_gw1.1.2331.1 N 0.000
Ame_R016002 Ailuropoda melanoleuca Ame_R016002 I 0.000
Ame_R004924 Ailuropoda melanoleuca Ame_R004924 I 0.000
Ame_R000168 Ailuropoda melanoleuca Ame_R000168 I 0.000
AMAG_06814 Allomyces macrogynus AMAG_06814 N 0.000
AMAG_15989 Allomyces macrogynus AMAG_15989 N 0.000
Aqu1.221345 Amphimedon queenslandica Aqu1.221345 I 0.000
ENSACAG00000009252 Anolis carolinensis ENSACAG00000009252 I 0.000
ENSACAG00000005547 Anolis carolinensis ENSACAG00000005547 I 0.000
ZFP36L2 Anolis carolinensis ENSACAG00000014740 I 0.000
AGAP010954 Anopheles gambiae AGAP010954 N 0.000
amel4_ncbi_hmm10964 Apis mellifera amel4_ncbi_hmm10964 I 0.000
BGIBMGA008337 Bombyx mori BGIBMGA008337 I 0.000
Q1JP65_BOVIN Bos taurus ENSBTAG00000003553 I 0.000
A7MB98_BOVIN Bos taurus ENSBTAG00000025434 I 0.000
estExt_fgenesh2_pg.C_680108 Branchiostoma floridae estExt_fgenesh2_pg.C_680108 I 0.000
LOC100405281 Callithrix jacchus ENSCJAG00000015116 I 0.000
LOC100386590 Callithrix jacchus ENSCJAG00000014571 I 0.000
LOC100397247 Callithrix jacchus ENSCJAG00000014156 I 0.000
ZFP36L2 Canis familiaris ENSCAFG00000002438 I 0.000
ZFP36L1 Canis familiaris ENSCAFG00000016497 I 0.000
gw1.534.24.1 Capitella teleta gw1.534.24.1 I 0.000
ZFP36L1 Cavia porcellus ENSCPOG00000025078 I 0.000
ZFP36 Cavia porcellus ENSCPOG00000011363 I 0.000
ZFP36L2 Cavia porcellus ENSCPOG00000022038 I 0.000
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.000
ZFP36L2 Choloepus hoffmanni ENSCHOG00000005595 N 0.000
Q4H2G7_CIOIN Ciona intestinalis ENSCING00000014446 I 0.000
ENSCSAVG00000002923 Ciona savignyi ENSCSAVG00000002923 I 0.000
CC1G_04402 Coprinopsis cinerea CC1G_04402 N 0.000
CpipJ_CPIJ018734 Culex pipiens CpipJ_CPIJ018734 I 0.000
CPIJ018734 Culex quinquefasciatus CPIJ018734 I 0.000
zfp36l1a Danio rerio ENSDARG00000016154 I 0.000
zfp36l1b Danio rerio ENSDARG00000021443 I 0.000
CABZ01070258.1 Danio rerio ENSDARG00000040503 I 0.000
zfp36l2 Danio rerio ENSDARG00000021806 I 0.000
ZFP36 Danio rerio ENSDARG00000044395 I 0.000
zgc:114130 Danio rerio ENSDARG00000040725 I 0.000
gw1.42.93.1 Daphnia pulex gw1.42.93.1 N 0.000
ZFP36L1 Dasypus novemcinctus ENSDNOG00000005159 I 0.000
DDB_G0285973 Dictyostelium discoideum DDB_G0285973 I 0.000
Zfp36 Dipodomys ordii ENSDORG00000013487 I 0.000
Zfp36l1 Dipodomys ordii ENSDORG00000008348 I 0.000
GF21384 Drosophila ananassae FBgn0098386 N 0.000
GG17735 Drosophila erecta FBgn0109957 N 0.000
GH17894 Drosophila grimshawi FBgn0125362 N 0.000
Tis11 Drosophila melanogaster FBgn0011837 N 0.000
GI21684 Drosophila mojavensis FBgn0144414 N 0.000
GL13141 Drosophila persimilis FBgn0150747 N 0.000
GA17935-RA Drosophila pseudoobscura FBgn0077944 N 0.000
GM11580 Drosophila sechellia FBgn0166523 N 0.000
GJ15863 Drosophila virilis FBgn0203050 N 0.000
GK25600 Drosophila willistoni FBgn0227559 N 0.000
GE17025 Drosophila yakuba FBgn0234511 N 0.000
EDI_287240 Entamoeba dispar EDI_287240 N 0.000
EHI_008770 Entamoeba histolytica EHI_008770 N 0.000
LOC100063597 Equus caballus ENSECAG00000018860 I 0.000
ZFP36L2 Felis catus ENSFCAG00000013462 N 0.000
ENSGACG00000013400 Gasterosteus aculeatus ENSGACG00000013400 I 0.000
ZFP36 Gasterosteus aculeatus ENSGACG00000008344 I 0.000
ENSGACG00000008351 Gasterosteus aculeatus ENSGACG00000008351 I 0.000
ZFP36L1 Gasterosteus aculeatus ENSGACG00000011271 I 0.000
ZFP36L2 Gorilla gorilla ENSGGOG00000001402 I 0.000
ZFP36 Gorilla gorilla ENSGGOG00000014399 I 0.000
64152 Helobdella robusta 64152 N 0.000
138584 Helobdella robusta 138584 N 0.000
153596 Helobdella robusta 153596 N 0.000
ZFP36L1 Homo sapiens ENSG00000185650 I 0.000
ZFP36 Homo sapiens ENSG00000128016 D 0.000
ZFP36L2 Homo sapiens ENSG00000152518 I 0.000
XP_002159721.1 Hydra magnipapillata XP_002159721.1 N 0.000
estExt_fgenesh2_pg.C_10793 Laccaria bicolor estExt_fgenesh2_pg.C_10793 N 0.000
gw1.30.59.1 Lottia gigantea gw1.30.59.1 N 0.000
ZFP36L2 Loxodonta africana ENSLAFG00000004265 I 0.000
ZFP36L1 Loxodonta africana ENSLAFG00000028594 I 0.000
ZFP36L1 Macropus eugenii ENSMEUG00000003070 I 0.000
ZFP36L2 Macropus eugenii ENSMEUG00000010649 I 0.000
ZFP36 Macropus eugenii ENSMEUG00000010317 I 0.000
ZFP36L2 Microcebus murinus ENSMICG00000010318 I 0.000
gw1.1.1133.1 Micromonas pusilla gw1.1.1133.1 N 0.000
ZFP36 Monodelphis domestica ENSMODG00000013494 I 0.000
ZFP36L2 Monodelphis domestica ENSMODG00000000407 I 0.000
fgenesh2_pg.scaffold_13000206 Monosiga brevicollis fgenesh2_pg.scaffold_13000206 N 0.000
Zfp36l2 Mus musculus ENSMUSG00000045817 I 0.000
Zfp36l3 Mus musculus ENSMUSG00000059334 I 0.000
Zfp36l1 Mus musculus ENSMUSG00000021127 I 0.000
Zfp36 Mus musculus ENSMUSG00000044786 I 0.000
ZFP36 Myotis lucifugus ENSMLUG00000002942 I 0.000
ZFP36L2 Myotis lucifugus ENSMLUG00000015588 I 0.000
nasonia_NCBI_hmm9264 Nasonia vitripennis nasonia_NCBI_hmm9264 I 0.000
e_gw.346.37.1 Nematostella vectensis e_gw.346.37.1 I 0.000
ZFP36L2 Ornithorhynchus anatinus ENSOANG00000002848 I 0.000
ZFP36L1 Oryctolagus cuniculus ENSOCUG00000003168 I 0.000
ZFP36 Oryctolagus cuniculus ENSOCUG00000003400 I 0.000
ENSORLG00000008378 Oryzias latipes ENSORLG00000008378 I 0.000
ENSORLG00000000589 Oryzias latipes ENSORLG00000000589 I 0.000
ZFP36L1 Oryzias latipes ENSORLG00000011106 I 0.000
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.000
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.000
0300010273 Ostreococcus tauri 0300010273 I 0.000
ZFP36L1 Otolemur garnettii ENSOGAG00000010033 N 0.000
ZFP36 Pan troglodytes ENSPTRG00000010968 I 0.000
XR_022888.1 Pan troglodytes ENSPTRG00000030712 I 0.000
ZFP36L2 Pan troglodytes ENSPTRG00000011870 I 0.000
fgenesh1_pg.C_scaffold_11000103 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000103 N 0.000
estExt_genemark.C_30534 Pleurotus ostreatus estExt_genemark.C_30534 N 0.000
EFA80829.1 Polysphondylium pallidum EFA80829.1 I 0.000
ENSPPYG00000005933 Pongo pygmaeus ENSPPYG00000005933 I 0.000
ENSPPYG00000012458 Pongo pygmaeus ENSPPYG00000012458 I 0.000
ENSPPYG00000010577 Pongo pygmaeus ENSPPYG00000010577 I 0.000
estExt_fgenesh3_pg.C_770054 Postia placenta estExt_fgenesh3_pg.C_770054 N 0.000
ZFP36L2 Procavia capensis ENSPCAG00000010765 I 0.000
ZFP36L1 Procavia capensis ENSPCAG00000005383 I 0.000
ZFP36 Pteropus vampyrus ENSPVAG00000011124 I 0.000
ZFP36L1 Pteropus vampyrus ENSPVAG00000011686 I 0.000
Zfp36l2 Rattus norvegicus ENSRNOG00000005067 I 0.000
Zfp36 Rattus norvegicus ENSRNOG00000019673 I 0.000
Zfp36l3 Rattus norvegicus ENSRNOG00000029788 I 0.000
TISB_RAT Rattus norvegicus ENSRNOG00000030024 I 0.000
PTSG_01604 Salpingoeca rosetta PTSG_01604 N 0.000
estExt_fgenesh1_pm.C_10824 Schizophyllum commune estExt_fgenesh1_pm.C_10824 N 0.000
e_gw1.45.79.1 Selaginella moellendorfii e_gw1.45.79.1 N 0.000
fgenesh2_pg.C_scaffold_32000041 Selaginella moellendorfii fgenesh2_pg.C_scaffold_32000041 N 0.000
estExt_fgenesh2_kg.C_10578 Serpula lacrymans estExt_fgenesh2_kg.C_10578 N 0.000
ZFP36L1 Spermophilus tridecemlineatus ENSSTOG00000009758 I 0.000
fgenesh1_pg.C_scaffold_4000193 Sporobolomyces roseus fgenesh1_pg.C_scaffold_4000193 N 0.000
XP_001175665.1 Strongylocentrotus purpuratus XP_001175665.1 I 0.000
XP_001175810.1 Strongylocentrotus purpuratus XP_001175810.1 I 0.000
XP_001178437.1 Strongylocentrotus purpuratus XP_001178437.1 I 0.000
XP_782811.1 Strongylocentrotus purpuratus XP_782811.1 I 0.000
ENSSSCG00000008460 Sus scrofa ENSSSCG00000008460 I 0.000
ZFP36 Sus scrofa ENSSSCG00000010708 I 0.000
ZFP36L1 Sus scrofa ENSSSCG00000002302 I 0.000
ZFP36L1 Taeniopygia guttata ENSTGUG00000011494 I 0.000
ZFP36 Takifugu rubripes ENSTRUG00000002023 I 0.000
ENSTRUG00000003178 Takifugu rubripes ENSTRUG00000003178 I 0.000
ZFP36L2 Takifugu rubripes ENSTRUG00000006923 I 0.000
ZFP36L1 Takifugu rubripes ENSTRUG00000012295 I 0.000
ZFP36L1 Tarsius syrichta ENSTSYG00000009284 I 0.000
ENSTNIG00000019802 Tetraodon nigroviridis ENSTNIG00000019802 I 0.000
ZFP36L2 Tetraodon nigroviridis ENSTNIG00000017103 I 0.000
ZFP36 Tetraodon nigroviridis ENSTNIG00000000183 I 0.000
ZFP36L1 Tetraodon nigroviridis ENSTNIG00000002277 I 0.000
e_gw1.40.110.1 Trichoplax adhaerens e_gw1.40.110.1 I 0.000
ZFP36 Tupaia belangeri ENSTBEG00000005948 I 0.000
ZFP36L2 Tupaia belangeri ENSTBEG00000012370 I 0.000
ZFP36L2 Tursiops truncatus ENSTTRG00000006356 I 0.000
ZFP36L1 Tursiops truncatus ENSTTRG00000003475 I 0.000
ZFP36 Tursiops truncatus ENSTTRG00000003564 I 0.000
AAH84197 Xenopus laevis AAH84197 I 0.000
AAH84221 Xenopus laevis AAH84221 I 0.000
AAI00163 Xenopus laevis AAI00163 I 0.000
AAI08849 Xenopus laevis AAI08849 I 0.000
BAC54909 Xenopus laevis BAC54909 I 0.000
Q7ZXW9 Xenopus laevis Q7ZXW9 I 0.000
AAH82435 Xenopus laevis AAH82435 I 0.000
AAH44086 Xenopus laevis AAH44086 I 0.000
AAD24209 Xenopus laevis AAD24209 I 0.000
AAD24208 Xenopus laevis AAD24208 I 0.000
AAD24207 Xenopus laevis AAD24207 I 0.000
Q805B4 Xenopus laevis Q805B4 I 0.000
zfp36l1 Xenopus tropicalis ENSXETG00000016987 I 0.000
zfp36l2 Xenopus tropicalis ENSXETG00000009274 I 0.000
zfp36 Xenopus tropicalis ENSXETG00000002899 I 0.000