BRADI4G38260 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI4G38260 T33297_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G38260.1 RRM 119 189
BRADI4G38260.1 RRM 214 283
BRADI4G38260.2 RRM 119 189
BRADI4G38260.2 RRM 214 284

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.796
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.782
ATRBP31 Arabidopsis thaliana AT4G24770-TAIR-G N 0.761
CP31B Arabidopsis thaliana AT5G50250-TAIR-G N 0.761
BRADI3G42700 Brachypodium distachyon BRADI3G42700 N 0.838
PK05280.1 Cannabis sativa PK05280.1 N 0.810
PK28733.1 Cannabis sativa PK28733.1 N 0.746
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.789
Glyma04g36420.1 Glycine max Glyma04g36420.1 N 0.739
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.754
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.768
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.775
MDP0000296631 Malus x domestica MDP0000296631 N 0.745
MDP0000218595 Malus x domestica MDP0000218595 N 0.817
MDP0000224531 Malus x domestica MDP0000224531 N 0.702
MDP0000299693 Malus x domestica MDP0000299693 N 0.745
MDP0000528470 Malus x domestica MDP0000528470 N 0.796
MDP0000919119 Malus x domestica MDP0000919119 N 0.810
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.761
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.803
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.817
mgf009747m Mimulus guttatus mgf009747m N 0.775
mgf008267m Mimulus guttatus mgf008267m N 0.796
mgf001484m Mimulus guttatus mgf001484m N 0.803
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.838
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.838
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.958
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.775
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.754
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.803
ppa008913m Prunus persica ppa008913m N 0.831
ppa009286m Prunus persica ppa009286m N 0.782
30147.m013835 Ricinus communis 30147.m013835 N 0.796
SB02G011330 Sorghum bicolor Sb02g011330 N 0.915
SB07G024400 Sorghum bicolor Sb07g024400 N 0.852
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.831
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.803
GRMZM2G158462 Zea mays GRMZM2G158462 N 0.831
GRMZM2G123234 Zea mays GRMZM2G123234 N 0.831
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.944