ENSCJAG00000010895 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000010895 T35580_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000020086 RRM 4 66
ENSCJAP00000020086 RRM 106 171

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s17730g6t1 Acyrtosiphon pisum DGIL_AUG5s17730g6t1 I 0.000
Ame_R018370 Ailuropoda melanoleuca Ame_R018370 I 0.922
SRSF6 Anolis carolinensis ENSACAG00000002061 I 0.798
ENSACAG00000005544 Anolis carolinensis ENSACAG00000005544 I 0.000
AGAP004592 Anopheles gambiae AGAP004592 I 0.000
amel4_ncbi_hmm6583 Apis mellifera amel4_ncbi_hmm6583 I 0.000
BGIBMGA010178 Bombyx mori BGIBMGA010178 I 0.000
A7MB38_BOVIN Bos taurus ENSBTAG00000013309 I 0.922
SFRS6_BOVIN Bos taurus ENSBTAG00000008527 I 0.783
estExt_fgenesh2_pm.C_690014 Branchiostoma floridae estExt_fgenesh2_pm.C_690014 I 0.752
SRSF6 Callithrix jacchus ENSCJAG00000017888 I 0.791
LOC100402973 Callithrix jacchus ENSCJAG00000009971 I 0.922
estExt_Genewise1Plus.C_1640045 Capitella teleta estExt_Genewise1Plus.C_1640045 I 0.713
SRSF4 Cavia porcellus ENSCPOG00000007263 I 0.922
ENSCING00000012370 Ciona intestinalis ENSCING00000012370 I 0.713
ENSCING00000004873 Ciona intestinalis ENSCING00000004873 I 0.713
CpipJ_CPIJ008634 Culex pipiens CpipJ_CPIJ008634 I 0.000
CPIJ008634 Culex quinquefasciatus CPIJ008634 I 0.000
srsf6a Danio rerio ENSDARG00000013729 I 0.791
srsf5a Danio rerio ENSDARG00000029818 I 0.000
srsf6b Danio rerio ENSDARG00000016783 I 0.760
estExt_Genewise1Plus.C_150169 Daphnia pulex estExt_Genewise1Plus.C_150169 I 0.705
SRSF4 Dasypus novemcinctus ENSDNOG00000000968 I 0.922
SRSF6 Dasypus novemcinctus ENSDNOG00000008410 I 0.791
Srsf4 Dipodomys ordii ENSDORG00000002459 I 0.915
Srsf6 Dipodomys ordii ENSDORG00000001945 I 0.791
GF17608 Drosophila ananassae FBgn0094626 I 0.000
GH18528 Drosophila grimshawi FBgn0125995 I 0.000
B52 Drosophila melanogaster FBgn0004587 D 0.000
GI22065 Drosophila mojavensis FBgn0144794 I 0.000
GL23543 Drosophila persimilis FBgn0161133 I 0.000
GA10599-RA Drosophila pseudoobscura FBgn0070656 I 0.000
GJ24113 Drosophila virilis FBgn0211197 I 0.000
GK13948 Drosophila willistoni FBgn0215954 I 0.000
SRSF6 Echinops telfairi ENSETEG00000006221 I 0.775
SRSF4 Erinaceus europaeus ENSEEUG00000008479 I 0.922
Q5ZKT4_CHICK Gallus gallus ENSGALG00000009484 I 0.000
ENSGACG00000011761 Gasterosteus aculeatus ENSGACG00000011761 I 0.000
SRSF4 Gasterosteus aculeatus ENSGACG00000002389 I 0.860
SRSF6 Gasterosteus aculeatus ENSGACG00000006084 I 0.767
SRSF6 Gorilla gorilla ENSGGOG00000009808 I 0.791
SRSF6 Homo sapiens ENSG00000124193 I 0.791
SRSF4 Homo sapiens ENSG00000116350 I 0.922
ISCW010321 Ixodes scapularis ISCW010321 I 0.000
ISCW010322 Ixodes scapularis ISCW010322 I 0.000
SRSF4 Loxodonta africana ENSLAFG00000002575 I 0.915
SRSF4 Macaca mulatta ENSMMUG00000007110 I 0.922
SRSF6 Macropus eugenii ENSMEUG00000014615 I 0.798
SRSF4 Meleagris gallopavo ENSMGAG00000002400 I 0.915
ENSMGAG00000011888 Meleagris gallopavo ENSMGAG00000011888 I 0.000
SRSF6 Microcebus murinus ENSMICG00000008537 I 0.783
SRSF6 Monodelphis domestica ENSMODG00000003107 I 0.798
SRSF4 Monodelphis domestica ENSMODG00000011052 I 0.922
Srsf6 Mus musculus ENSMUSG00000016921 I 0.775
Srsf4 Mus musculus ENSMUSG00000028911 I 0.922
nasonia_NCBI_hmm370623 Nasonia vitripennis nasonia_NCBI_hmm370623 I 0.000
nasonia_NCBI_hmm368623 Nasonia vitripennis nasonia_NCBI_hmm368623 I 0.000
SRSF4 Ochotona princeps ENSOPRG00000010098 I 0.915
SRSF4 Oryctolagus cuniculus ENSOCUG00000001837 I 0.922
SRSF4 Oryzias latipes ENSORLG00000009430 I 0.860
SRSF5 Oryzias latipes ENSORLG00000009268 I 0.000
SRSF6 Oryzias latipes ENSORLG00000003530 I 0.783
SRSF4 Pan troglodytes ENSPTRG00000000445 I 0.922
PHUM290500 Pediculus humanus PHUM290500 I 0.713
ENSPPYG00000001629 Pongo pygmaeus ENSPPYG00000001629 I 0.922
ENSPPYG00000011019 Pongo pygmaeus ENSPPYG00000011019 I 0.791
SRSF6 Procavia capensis ENSPCAG00000010954 I 0.798
SRSF4 Procavia capensis ENSPCAG00000009879 I 0.915
SRSF6 Pteropus vampyrus ENSPVAG00000015232 I 0.791
Sfrs4 Rattus norvegicus ENSRNOG00000010007 I 0.922
Sfrs6 Rattus norvegicus ENSRNOG00000006380 I 0.775
XP_001180940.1 Strongylocentrotus purpuratus XP_001180940.1 I 0.713
XP_798746.1 Strongylocentrotus purpuratus XP_798746.1 I 0.713
SRSF4 Sus scrofa ENSSSCG00000003588 I 0.922
XP_002200515.1 Taeniopygia guttata ENSTGUG00000011492 I 0.000
SFRS6 Taeniopygia guttata ENSTGUG00000003455 I 0.806
PACS2 Takifugu rubripes ENSTRUG00000010740 I 0.000
SRSF4 Takifugu rubripes ENSTRUG00000011891 I 0.868
SRSF4 Tarsius syrichta ENSTSYG00000007903 I 0.915
SRSF6 Tetraodon nigroviridis ENSTNIG00000001692 I 0.767
SRSF4 Tetraodon nigroviridis ENSTNIG00000000115 I 0.868
SRSF4 Tetraodon nigroviridis ENSTNIG00000005573 I 0.868
SRSF4 Tursiops truncatus ENSTTRG00000002572 I 0.922
AAH46668 Xenopus laevis AAH46668 I 0.783
AAH44085 Xenopus laevis AAH44085 I 0.000
AAH71160 Xenopus laevis AAH71160 I 0.000
srsf4 Xenopus tropicalis ENSXETG00000014380 I 0.775
srsf6 Xenopus tropicalis ENSXETG00000025503 I 0.798
XB-GENE-5954653 Xenopus tropicalis ENSXETG00000017937 I 0.000