RBM46 (Equus caballus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSECAG00000007649 T36577_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM46
M052_0.6 		Homo sapiens RAUSAWD RNAcompete
Ray et al.(2013)
RNCMPT00054 		0.985
ENSGALG00000014267
M234_0.6 		Gallus gallus GAUGAW RNAcompete
Ray et al.(2013)
RNCMPT00279 		0.727
ENSXETG00000012802
M235_0.6 		Xenopus tropicalis GAUGAWH RNAcompete
Ray et al.(2013)
RNCMPT00280 		0.722
ENSGALG00000003765
M244_0.6 		Gallus gallus DUAAUUV RNAcompete
Ray et al.(2013)
RNCMPT00291 		0.700
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000005680 RRM 63 132
ENSECAP00000005680 RRM 143 210
ENSECAP00000005680 RRM 238 302

Links

Other RRM family RBPs
Other Equus caballus RBPs

105 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017773 Ailuropoda melanoleuca Ame_R017773 I 0.985
Ame_R017652 Ailuropoda melanoleuca Ame_R017652 I 0.744
RBM47 Anolis carolinensis ENSACAG00000011833 I 0.744
RBM46 Anolis carolinensis ENSACAG00000015599 I 0.980
A5D9E0_BOVIN Bos taurus ENSBTAG00000002356 I 0.744
A1CF Bos taurus ENSBTAG00000021195 I 0.704
RBM46 Bos taurus ENSBTAG00000001696 I 0.980
e_gw.60.249.1 Branchiostoma floridae e_gw.60.249.1 I 0.739
e_gw.262.30.1 Branchiostoma floridae e_gw.262.30.1 I 0.734
e_gw.262.16.1 Branchiostoma floridae e_gw.262.16.1 I 0.730
LOC100409217 Callithrix jacchus ENSCJAG00000001768 I 0.975
A1CF Callithrix jacchus ENSCJAG00000005045 I 0.709
LOC100410421 Callithrix jacchus ENSCJAG00000019385 I 0.744
RBM47_CANFA Canis familiaris ENSCAFG00000015898 I 0.734
RBM46 Canis familiaris ENSCAFG00000008473 I 0.985
estExt_Genewise1Plus.C_20056 Capitella teleta estExt_Genewise1Plus.C_20056 I 0.727
ENSCPOG00000010284 Cavia porcellus ENSCPOG00000010284 I 0.970
A1CF Cavia porcellus ENSCPOG00000009807 I 0.709
ENSCPOG00000020396 Cavia porcellus ENSCPOG00000020396 I 0.961
ENSCPOG00000019272 Cavia porcellus ENSCPOG00000019272 I 0.941
RBM47 Cavia porcellus ENSCPOG00000014100 I 0.744
RBM47 Choloepus hoffmanni ENSCHOG00000011731 I 0.744
RBM46 Choloepus hoffmanni ENSCHOG00000003429 I 0.985
A1CF Choloepus hoffmanni ENSCHOG00000009089 I 0.709
ENSCING00000004101 Ciona intestinalis ENSCING00000004101 I 0.709
ENSCSAVG00000000326 Ciona savignyi ENSCSAVG00000000326 I 0.719
rbm46 Danio rerio ENSDARG00000079452 I 0.803
RBM47 Danio rerio ENSDARG00000061985 I 0.729
RBM46 Dasypus novemcinctus ENSDNOG00000016195 I 0.975
RBM47 Dasypus novemcinctus ENSDNOG00000006858 I 0.744
Rbm46 Dipodomys ordii ENSDORG00000006405 I 0.951
RBM47 Echinops telfairi ENSETEG00000009194 I 0.744
RBM46 Echinops telfairi ENSETEG00000014902 I 0.985
A1CF Equus caballus ENSECAG00000010424 I 0.704
LOC100063743 Equus caballus ENSECAG00000004400 I 0.734
RBM46 Erinaceus europaeus ENSEEUG00000011824 I 0.941
RBM46 Felis catus ENSFCAG00000009246 I 0.970
RBM47 Felis catus ENSFCAG00000012399 I 0.744
ENSGALG00000014267 Gallus gallus ENSGALG00000014267 D 0.744
RBM46 Gallus gallus ENSGALG00000009278 I 0.887
ENSGALG00000003765 Gallus gallus ENSGALG00000003765 D 0.700
RBM47 Gasterosteus aculeatus ENSGACG00000016223 I 0.729
RBM46 Gorilla gorilla ENSGGOG00000001876 I 0.985
RBM47 Gorilla gorilla ENSGGOG00000001367 I 0.744
RBM47 Homo sapiens ENSG00000163694 I 0.744
RBM46 Homo sapiens ENSG00000151962 D 0.985
RBM46 Loxodonta africana ENSLAFG00000015448 I 0.980
RBM47 Loxodonta africana ENSLAFG00000011998 I 0.744
A1CF Loxodonta africana ENSLAFG00000015462 I 0.709
RBM46 Macaca mulatta ENSMMUG00000021147 I 0.985
RBM47 Macaca mulatta ENSMMUG00000012036 I 0.744
A1CF Macaca mulatta ENSMMUG00000007077 I 0.709
RBM47 Macropus eugenii ENSMEUG00000009516 I 0.754
RBM46 Macropus eugenii ENSMEUG00000013328 I 0.980
RBM47 Meleagris gallopavo ENSMGAG00000012226 I 0.744
A1CF Meleagris gallopavo ENSMGAG00000001507 I 0.700
RBM46 Meleagris gallopavo ENSMGAG00000001457 I 0.803
RBM46 Monodelphis domestica ENSMODG00000001302 I 0.985
ENSMODG00000007003 Monodelphis domestica ENSMODG00000007003 I 0.754
XM_001362366.1 Monodelphis domestica ENSMODG00000020561 I 0.709
Rbm47 Mus musculus ENSMUSG00000070780 I 0.739
A1cf Mus musculus ENSMUSG00000052595 I 0.709
Rbm46 Mus musculus ENSMUSG00000033882 I 0.975
RBM46 Myotis lucifugus ENSMLUG00000003221 I 0.980
RBM46 Ochotona princeps ENSOPRG00000007136 I 0.882
RBM47 Ornithorhynchus anatinus ENSOANG00000008978 I 0.739
A1CF Ornithorhynchus anatinus ENSOANG00000007360 I 0.702
RBM46 Ornithorhynchus anatinus ENSOANG00000002141 I 0.946
RBM46 Oryctolagus cuniculus ENSOCUG00000017859 I 0.985
RBM47 Oryctolagus cuniculus ENSOCUG00000012034 I 0.744
A1CF Oryctolagus cuniculus ENSOCUG00000011587 I 0.704
RBM47 Oryzias latipes ENSORLG00000005847 I 0.729
RBM46 Oryzias latipes ENSORLG00000002429 I 0.737
RBM47 Pan troglodytes ENSPTRG00000016006 I 0.744
RBM46 Pan troglodytes ENSPTRG00000016538 I 0.985
ENSPPYG00000002819 Pongo pygmaeus ENSPPYG00000002819 I 0.709
ENSPPYG00000014688 Pongo pygmaeus ENSPPYG00000014688 I 0.735
ENSPPYG00000015144 Pongo pygmaeus ENSPPYG00000015144 I 0.985
RBM47 Procavia capensis ENSPCAG00000011879 I 0.744
RBM47 Pteropus vampyrus ENSPVAG00000003812 I 0.744
RBM46 Pteropus vampyrus ENSPVAG00000008376 I 0.985
A1cf Rattus norvegicus ENSRNOG00000033195 I 0.704
Rbm46 Rattus norvegicus ENSRNOG00000025823 I 0.985
Rbm47 Rattus norvegicus ENSRNOG00000002408 I 0.739
RBM47 Sorex araneus ENSSARG00000001735 I 0.744
RBM46 Sorex araneus ENSSARG00000006520 I 0.985
XP_001196183.1 Strongylocentrotus purpuratus XP_001196183.1 I 0.734
XP_781163.1 Strongylocentrotus purpuratus XP_781163.1 I 0.734
RBM46 Sus scrofa ENSSSCG00000008994 I 0.985
A1CF Sus scrofa ENSSSCG00000010431 I 0.709
RBM47 Sus scrofa ENSSSCG00000008796 I 0.744
A1CF Taeniopygia guttata ENSTGUG00000005090 I 0.704
RBM46 Taeniopygia guttata ENSTGUG00000005307 I 0.921
RBM47 Taeniopygia guttata ENSTGUG00000008705 I 0.744
RBM47 Takifugu rubripes ENSTRUG00000014050 I 0.724
RBM46 Takifugu rubripes ENSTRUG00000004237 I 0.766
RBM46 Tarsius syrichta ENSTSYG00000010435 I 0.975
A1CF Tarsius syrichta ENSTSYG00000001755 I 0.714
RBM46 Tetraodon nigroviridis ENSTNIG00000008714 I 0.741
RBM47 Tetraodon nigroviridis ENSTNIG00000006127 I 0.724
RBM46 Tupaia belangeri ENSTBEG00000013949 I 0.970
RBM47 Tursiops truncatus ENSTTRG00000002839 I 0.744
RBM46 Tursiops truncatus ENSTTRG00000001239 I 0.966
ENSXETG00000012802 Xenopus tropicalis ENSXETG00000012802 D 0.739
RBM46_XENTR Xenopus tropicalis ENSXETG00000022412 I 0.833