HNRNPR (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000010120 T36813_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSGALG00000000814
M242_0.6 		Gallus gallus MMAAAWY RNAcompete
Ray et al.(2013)
RNCMPT00288 		0.931
ENSXETG00000007102
M243_0.6 		Xenopus tropicalis MAAAAAG RNAcompete
Ray et al.(2013)
RNCMPT00289 		0.882
ENSXETG00000018075
M236_0.6 		Xenopus tropicalis MAAAWWD RNAcompete
Ray et al.(2013)
RNCMPT00281 		0.813
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000009244 RRM 167 235
ENSEEUP00000009244 RRM 248 318
ENSEEUP00000009244 RRM 346 408

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R001024 Ailuropoda melanoleuca Ame_R001024 I 0.951
Ame_R011496 Ailuropoda melanoleuca Ame_R011496 I 0.809
SYNCRIP Anolis carolinensis ENSACAG00000015234 I 0.799
HNRNPR Anolis carolinensis ENSACAG00000017593 I 0.941
A3KMV6_BOVIN Bos taurus ENSBTAG00000016578 I 0.951
A7E355_BOVIN Bos taurus ENSBTAG00000006672 I 0.809
HNRNPR Callithrix jacchus ENSCJAG00000005512 I 0.951
ENSCJAG00000013031 Callithrix jacchus ENSCJAG00000013031 I 0.864
SYNCRIP Callithrix jacchus ENSCJAG00000015352 I 0.809
SYNCRIP Canis familiaris ENSCAFG00000003024 I 0.809
HNRNPR Canis familiaris ENSCAFG00000013308 I 0.956
SYNCRIP Cavia porcellus ENSCPOG00000012415 I 0.809
ENSCPOG00000009653 Cavia porcellus ENSCPOG00000009653 I 0.951
HNRNPR Choloepus hoffmanni ENSCHOG00000005090 I 0.951
syncripl Danio rerio ENSDARG00000026723 I 0.780
syncrip Danio rerio ENSDARG00000040184 I 0.809
SYNCRIP Echinops telfairi ENSETEG00000020109 I 0.809
HNRNPR Equus caballus ENSECAG00000013733 I 0.951
HNRNPR Felis catus ENSFCAG00000019123 I 0.710
Q5ZLH7_CHICK Gallus gallus ENSGALG00000015830 I 0.804
ENSGALG00000000814 Gallus gallus ENSGALG00000000814 D 0.931
SYNCRIP Gasterosteus aculeatus ENSGACG00000011665 I 0.809
SYNCRIP Gasterosteus aculeatus ENSGACG00000009124 I 0.795
HNRNPR Gasterosteus aculeatus ENSGACG00000003202 I 0.824
SYNCRIP Gorilla gorilla ENSGGOG00000012898 I 0.809
HNRNPR Gorilla gorilla ENSGGOG00000013250 I 0.956
HNRNPR Homo sapiens ENSG00000125944 I 0.956
SYNCRIP Homo sapiens ENSG00000135316 I 0.809
HNRNPR Loxodonta africana ENSLAFG00000012793 I 0.951
SYNCRIP Loxodonta africana ENSLAFG00000018172 I 0.809
SYNCRIP Macaca mulatta ENSMMUG00000012575 I 0.809
HNRNPR Macaca mulatta ENSMMUG00000010970 I 0.951
HNRNPR Macropus eugenii ENSMEUG00000003769 I 0.788
SYNCRIP Meleagris gallopavo ENSMGAG00000013690 I 0.804
HNRNPR Meleagris gallopavo ENSMGAG00000001000 I 0.931
SYNCRIP Microcebus murinus ENSMICG00000007192 I 0.809
XM_001362737.1 Monodelphis domestica ENSMODG00000000609 I 0.809
HNRNPR Monodelphis domestica ENSMODG00000016144 I 0.951
XM_001366708.1 Monodelphis domestica ENSMODG00000018345 I 0.809
Hnrnpr Mus musculus ENSMUSG00000066037 I 0.951
Syncrip Mus musculus ENSMUSG00000032423 I 0.814
SYNCRIP Myotis lucifugus ENSMLUG00000006919 I 0.809
HNRNPR Myotis lucifugus ENSMLUG00000007582 I 0.907
HNRNPR Ochotona princeps ENSOPRG00000014561 I 0.828
SYNCRIP Ornithorhynchus anatinus ENSOANG00000010099 I 0.799
HNRNPR Ornithorhynchus anatinus ENSOANG00000003961 I 0.936
SYNCRIP Oryctolagus cuniculus ENSOCUG00000000601 I 0.809
HNRNPR Oryctolagus cuniculus ENSOCUG00000006686 I 0.956
SYNCRIP Oryzias latipes ENSORLG00000014840 I 0.785
SYNCRIP Oryzias latipes ENSORLG00000009190 I 0.814
HNRNPR Oryzias latipes ENSORLG00000002515 I 0.820
HNRNPR Otolemur garnettii ENSOGAG00000009179 I 0.936
XR_022081.1 Pan troglodytes ENSPTRG00000018393 I 0.809
HNRNPR Pan troglodytes ENSPTRG00000000324 I 0.951
ENSPPYG00000016819 Pongo pygmaeus ENSPPYG00000016819 I 0.809
ENSPPYG00000001744 Pongo pygmaeus ENSPPYG00000001744 I 0.951
HNRNPR Procavia capensis ENSPCAG00000010462 I 0.783
SYNCRIP Pteropus vampyrus ENSPVAG00000011888 I 0.809
HNRNPR Pteropus vampyrus ENSPVAG00000014804 I 0.951
Syncrip Rattus norvegicus ENSRNOG00000000204 I 0.814
Hnrnpr Rattus norvegicus ENSRNOG00000011910 I 0.951
ENSRNOG00000033356 Rattus norvegicus ENSRNOG00000033356 I 0.752
HNRNPR Sorex araneus ENSSARG00000001732 I 0.951
SYNCRIP Sorex araneus ENSSARG00000005967 I 0.809
SYNCRIP Sus scrofa ENSSSCG00000004294 I 0.809
HNRNPR Taeniopygia guttata ENSTGUG00000000880 I 0.931
SYNCRIP Takifugu rubripes ENSTRUG00000014766 I 0.800
SYNCRIP Takifugu rubripes ENSTRUG00000005365 I 0.780
HNRNPR Takifugu rubripes ENSTRUG00000008817 I 0.819
SYNCRIP Tarsius syrichta ENSTSYG00000013305 I 0.809
HNRNPR Tetraodon nigroviridis ENSTNIG00000017576 I 0.819
SYNCRIP Tetraodon nigroviridis ENSTNIG00000017299 I 0.780
SYNCRIP Tetraodon nigroviridis ENSTNIG00000002821 I 0.790
HNRNPR Tupaia belangeri ENSTBEG00000002251 I 0.951
HNRNPR Tursiops truncatus ENSTTRG00000007752 I 0.873
SYNCRIP Vicugna pacos ENSVPAG00000001061 I 0.809
AAH70529 Xenopus laevis AAH70529 I 0.814
AAI61702 Xenopus laevis AAI61702 I 0.872
ENSXETG00000007102 Xenopus tropicalis ENSXETG00000007102 D 0.882
ENSXETG00000018075 Xenopus tropicalis ENSXETG00000018075 D 0.804