SPEN (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000003662 T37623_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000005794 RRM 8 74
ENSGALP00000005794 RRM 336 406
ENSGALP00000005794 RRM 439 506
ENSGALP00000005794 RRM 518 582
ENSGALP00000039031 RRM 8 74
ENSGALP00000039031 RRM 337 407
ENSGALP00000039031 RRM 440 507
ENSGALP00000039031 RRM 519 583

Links

Other RRM family RBPs
Other Gallus gallus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R009637 Ailuropoda melanoleuca Ame_R009637 N 0.908
SPEN Anolis carolinensis ENSACAG00000013761 N 0.915
SPEN Bos taurus ENSBTAG00000018729 N 0.982
SPEN Callithrix jacchus ENSCJAG00000008527 N 0.982
SPEN Canis familiaris ENSCAFG00000016132 N 0.863
SPEN Cavia porcellus ENSCPOG00000014036 N 0.863
spen Danio rerio ENSDARG00000074245 N 0.815
SPEN Danio rerio ENSDARG00000074332 N 0.882
LOC100053790 Equus caballus ENSECAG00000008833 N 0.908
SPEN Erinaceus europaeus ENSEEUG00000010255 N 0.852
SPEN Gasterosteus aculeatus ENSGACG00000001176 N 0.889
SPEN Gasterosteus aculeatus ENSGACG00000005341 N 0.915
SPEN Gorilla gorilla ENSGGOG00000012041 N 0.978
SPEN Homo sapiens ENSG00000065526 N 0.978
SPEN Loxodonta africana ENSLAFG00000004524 N 0.904
SPEN Macaca mulatta ENSMMUG00000008026 N 0.970
SPEN Macropus eugenii ENSMEUG00000002422 N 0.756
SPEN Meleagris gallopavo ENSMGAG00000005180 N 1.000
SPEN Monodelphis domestica ENSMODG00000003411 N 0.908
Spen Mus musculus ENSMUSG00000040761 N 0.974
SPEN Myotis lucifugus ENSMLUG00000010144 N 0.775
SPEN Ochotona princeps ENSOPRG00000015800 N 0.900
SPEN Ornithorhynchus anatinus ENSOANG00000004165 N 0.783
SPEN Oryctolagus cuniculus ENSOCUG00000010840 N 0.863
SPEN Oryzias latipes ENSORLG00000018414 N 0.889
XR_024490.1 Pan troglodytes ENSPTRG00000000210 N 0.934
ENSPPYG00000001834 Pongo pygmaeus ENSPPYG00000001834 N 0.978
SPEN Pteropus vampyrus ENSPVAG00000013794 N 0.974
LOC690911 Rattus norvegicus ENSRNOG00000033556 N 0.970
SPEN Spermophilus tridecemlineatus ENSSTOG00000005637 N 0.845
SPEN Takifugu rubripes ENSTRUG00000001017 N 0.919
SPEN Takifugu rubripes ENSTRUG00000011123 N 0.878
SPEN Tarsius syrichta ENSTSYG00000007170 N 0.889
SPEN Tetraodon nigroviridis ENSTNIG00000010907 N 0.915
SPEN Tetraodon nigroviridis ENSTNIG00000014666 N 0.886
SPEN Tupaia belangeri ENSTBEG00000003628 N 0.919
SPEN Tursiops truncatus ENSTTRG00000015704 N 0.875