SPEN (Tupaia belangeri)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTBEG00000003628 T41710_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTBEP00000003182 RRM 1 52
ENSTBEP00000003182 RRM 312 382
ENSTBEP00000003182 RRM 415 482
ENSTBEP00000003182 RRM 494 558

Links

Other RRM family RBPs
Other Tupaia belangeri RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R009637 Ailuropoda melanoleuca Ame_R009637 N 0.977
SPEN Anolis carolinensis ENSACAG00000013761 N 0.949
SPEN Bos taurus ENSBTAG00000018729 N 0.937
SPEN Callithrix jacchus ENSCJAG00000008527 N 0.937
SPEN Canis familiaris ENSCAFG00000016132 N 0.930
SPEN Cavia porcellus ENSCPOG00000014036 N 0.934
spen Danio rerio ENSDARG00000074245 N 0.756
SPEN Danio rerio ENSDARG00000074332 N 0.823
LOC100053790 Equus caballus ENSECAG00000008833 N 0.980
SPEN Erinaceus europaeus ENSEEUG00000010255 N 0.815
SPEN Gallus gallus ENSGALG00000003662 N 0.919
SPEN Gasterosteus aculeatus ENSGACG00000005341 N 0.856
SPEN Gasterosteus aculeatus ENSGACG00000001176 N 0.830
SPEN Gorilla gorilla ENSGGOG00000012041 N 0.934
SPEN Homo sapiens ENSG00000065526 N 0.934
SPEN Loxodonta africana ENSLAFG00000004524 N 0.977
SPEN Macaca mulatta ENSMMUG00000008026 N 0.926
SPEN Macropus eugenii ENSMEUG00000002422 N 0.785
SPEN Meleagris gallopavo ENSMGAG00000005180 N 0.919
SPEN Monodelphis domestica ENSMODG00000003411 N 0.942
Spen Mus musculus ENSMUSG00000040761 N 0.930
SPEN Myotis lucifugus ENSMLUG00000010144 N 0.765
SPEN Ochotona princeps ENSOPRG00000015800 N 0.965
SPEN Ornithorhynchus anatinus ENSOANG00000004165 N 0.813
SPEN Oryctolagus cuniculus ENSOCUG00000010840 N 0.908
SPEN Oryzias latipes ENSORLG00000018414 N 0.827
XR_024490.1 Pan troglodytes ENSPTRG00000000210 N 0.929
ENSPPYG00000001834 Pongo pygmaeus ENSPPYG00000001834 N 0.934
SPEN Pteropus vampyrus ENSPVAG00000013794 N 0.934
LOC690911 Rattus norvegicus ENSRNOG00000033556 N 0.926
SPEN Spermophilus tridecemlineatus ENSSTOG00000005637 N 0.910
SPEN Takifugu rubripes ENSTRUG00000001017 N 0.860
SPEN Takifugu rubripes ENSTRUG00000011123 N 0.823
SPEN Tarsius syrichta ENSTSYG00000007170 N 0.957
SPEN Tetraodon nigroviridis ENSTNIG00000010907 N 0.856
SPEN Tetraodon nigroviridis ENSTNIG00000014666 N 0.830
SPEN Tursiops truncatus ENSTTRG00000015704 N 0.941