HNRNPR (Tursiops truncatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTTRG00000007752 T42594_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSGALG00000000814
M242_0.6 		Gallus gallus MMAAAWY RNAcompete
Ray et al.(2013)
RNCMPT00288 		0.887
ENSXETG00000007102
M243_0.6 		Xenopus tropicalis MAAAAAG RNAcompete
Ray et al.(2013)
RNCMPT00289 		0.838
ENSXETG00000018075
M236_0.6 		Xenopus tropicalis MAAAWWD RNAcompete
Ray et al.(2013)
RNCMPT00281 		0.775
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000007326 RRM 167 235
ENSTTRP00000007326 RRM 248 318
ENSTTRP00000007326 RRM 346 395

Links

Other RRM family RBPs
Other Tursiops truncatus RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R001024 Ailuropoda melanoleuca Ame_R001024 I 0.906
Ame_R011496 Ailuropoda melanoleuca Ame_R011496 I 0.776
SYNCRIP Anolis carolinensis ENSACAG00000015234 I 0.766
HNRNPR Anolis carolinensis ENSACAG00000017593 I 0.901
A3KMV6_BOVIN Bos taurus ENSBTAG00000016578 I 0.906
A7E355_BOVIN Bos taurus ENSBTAG00000006672 I 0.776
HNRNPR Callithrix jacchus ENSCJAG00000005512 I 0.921
ENSCJAG00000013031 Callithrix jacchus ENSCJAG00000013031 I 0.808
SYNCRIP Callithrix jacchus ENSCJAG00000015352 I 0.776
SYNCRIP Canis familiaris ENSCAFG00000003024 I 0.783
HNRNPR Canis familiaris ENSCAFG00000013308 I 0.912
SYNCRIP Cavia porcellus ENSCPOG00000012415 I 0.776
ENSCPOG00000009653 Cavia porcellus ENSCPOG00000009653 I 0.906
HNRNPR Choloepus hoffmanni ENSCHOG00000005090 I 0.921
syncripl Danio rerio ENSDARG00000026723 I 0.762
syncrip Danio rerio ENSDARG00000040184 I 0.776
SYNCRIP Echinops telfairi ENSETEG00000020109 I 0.776
HNRNPR Equus caballus ENSECAG00000013733 I 0.906
HNRNPR Erinaceus europaeus ENSEEUG00000010120 I 0.873
Q5ZLH7_CHICK Gallus gallus ENSGALG00000015830 I 0.771
ENSGALG00000000814 Gallus gallus ENSGALG00000000814 D 0.887
SYNCRIP Gasterosteus aculeatus ENSGACG00000011665 I 0.776
SYNCRIP Gasterosteus aculeatus ENSGACG00000009124 I 0.772
HNRNPR Gasterosteus aculeatus ENSGACG00000003202 I 0.780
SYNCRIP Gorilla gorilla ENSGGOG00000012898 I 0.776
HNRNPR Gorilla gorilla ENSGGOG00000013250 I 0.912
HNRNPR Homo sapiens ENSG00000125944 I 0.921
SYNCRIP Homo sapiens ENSG00000135316 I 0.776
HNRNPR Loxodonta africana ENSLAFG00000012793 I 0.906
SYNCRIP Loxodonta africana ENSLAFG00000018172 I 0.776
SYNCRIP Macaca mulatta ENSMMUG00000012575 I 0.776
HNRNPR Macaca mulatta ENSMMUG00000010970 I 0.906
HNRNPR Macropus eugenii ENSMEUG00000003769 I 0.739
SYNCRIP Meleagris gallopavo ENSMGAG00000013690 I 0.771
HNRNPR Meleagris gallopavo ENSMGAG00000001000 I 0.887
SYNCRIP Microcebus murinus ENSMICG00000007192 I 0.776
XM_001362737.1 Monodelphis domestica ENSMODG00000000609 I 0.776
HNRNPR Monodelphis domestica ENSMODG00000016144 I 0.916
XM_001366708.1 Monodelphis domestica ENSMODG00000018345 I 0.776
Hnrnpr Mus musculus ENSMUSG00000066037 I 0.906
Syncrip Mus musculus ENSMUSG00000032423 I 0.780
SYNCRIP Myotis lucifugus ENSMLUG00000006919 I 0.776
HNRNPR Myotis lucifugus ENSMLUG00000007582 I 0.853
HNRNPR Ochotona princeps ENSOPRG00000014561 I 0.937
HNRNPR Ornithorhynchus anatinus ENSOANG00000003961 I 0.892
SYNCRIP Ornithorhynchus anatinus ENSOANG00000010099 I 0.766
SYNCRIP Oryctolagus cuniculus ENSOCUG00000000601 I 0.776
HNRNPR Oryctolagus cuniculus ENSOCUG00000006686 I 0.912
SYNCRIP Oryzias latipes ENSORLG00000014840 I 0.767
SYNCRIP Oryzias latipes ENSORLG00000009190 I 0.776
HNRNPR Oryzias latipes ENSORLG00000002515 I 0.780
HNRNPR Otolemur garnettii ENSOGAG00000009179 I 0.921
XR_022081.1 Pan troglodytes ENSPTRG00000018393 I 0.776
HNRNPR Pan troglodytes ENSPTRG00000000324 I 0.921
ENSPPYG00000016819 Pongo pygmaeus ENSPPYG00000016819 I 0.776
ENSPPYG00000001744 Pongo pygmaeus ENSPPYG00000001744 I 0.906
HNRNPR Procavia capensis ENSPCAG00000010462 I 0.744
SYNCRIP Pteropus vampyrus ENSPVAG00000011888 I 0.776
HNRNPR Pteropus vampyrus ENSPVAG00000014804 I 0.921
ENSRNOG00000033356 Rattus norvegicus ENSRNOG00000033356 I 0.714
Syncrip Rattus norvegicus ENSRNOG00000000204 I 0.780
Hnrnpr Rattus norvegicus ENSRNOG00000011910 I 0.906
HNRNPR Sorex araneus ENSSARG00000001732 I 0.921
SYNCRIP Sorex araneus ENSSARG00000005967 I 0.776
SYNCRIP Sus scrofa ENSSSCG00000004294 I 0.776
HNRNPR Taeniopygia guttata ENSTGUG00000000880 I 0.887
SYNCRIP Takifugu rubripes ENSTRUG00000014766 I 0.767
HNRNPR Takifugu rubripes ENSTRUG00000008817 I 0.771
SYNCRIP Takifugu rubripes ENSTRUG00000005365 I 0.762
SYNCRIP Tarsius syrichta ENSTSYG00000013305 I 0.776
HNRNPR Tetraodon nigroviridis ENSTNIG00000017576 I 0.771
SYNCRIP Tetraodon nigroviridis ENSTNIG00000017299 I 0.762
SYNCRIP Tetraodon nigroviridis ENSTNIG00000002821 I 0.762
HNRNPR Tupaia belangeri ENSTBEG00000002251 I 0.921
SYNCRIP Vicugna pacos ENSVPAG00000001061 I 0.776
AAH70529 Xenopus laevis AAH70529 I 0.771
AAI61702 Xenopus laevis AAI61702 I 0.828
ENSXETG00000007102 Xenopus tropicalis ENSXETG00000007102 D 0.838
ENSXETG00000018075 Xenopus tropicalis ENSXETG00000018075 D 0.766