CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Smp_108820
(
Schistosoma mansoni
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Smp_108820
T58654_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Smp_108820
RRM
103
172
LFVSNLDCGVSDADIQELFSEFGTLKTAAVHYDCSGRSLGTAHVHFLQKADALKAMKQYDGVPLDGRPMN
Links
Other
RRM
family RBPs
Other
Schistosoma mansoni
RBPs
93 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBN22901
Caenorhabditis brenneri
CBN22901
N
0.000
CBG07980
Caenorhabditis briggsae
CBG07980
N
0.000
Y18D10A.8
Caenorhabditis elegans
Y18D10A.8
N
0.000
CJA04133
Caenorhabditis japonica
CJA04133
N
0.000
CRE13901
Caenorhabditis remanei
CRE13901
N
0.000
PPA11211
Pristionchus pacificus
PPA11211
N
0.000
WUBG_05417
Wuchereria bancrofti
WUBG_05417
N
0.000