MKRN1 (Oryzias latipes)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSORLG00000012765 T03145_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000015987 CCCH ZF 17 42
ENSORLP00000015987 CCCH ZF 47 72
ENSORLP00000015987 CCCH ZF 155 179
ENSORLP00000015987 CCCH ZF 311 337
ENSORLP00000015988 CCCH ZF 18 43
ENSORLP00000015988 CCCH ZF 48 73
ENSORLP00000015988 CCCH ZF 156 180
ENSORLP00000015988 CCCH ZF 312 338

Links

Other CCCH ZF family RBPs
Other Oryzias latipes RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MKRN1 Gasterosteus aculeatus ENSGACG00000019227 N 0.849
mkrn1 Danio rerio ENSDARG00000041665 N 0.849
MKRN1 Tetraodon nigroviridis ENSTNIG00000007231 N 0.840
NP_001072050.1 Takifugu rubripes ENSTRUG00000012057 N 0.830
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.817
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.817
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.810
MKRN1 Homo sapiens ENSG00000133606 N 0.800
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.800
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.800
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.800
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.800
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.790
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.790
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.771
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.771
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.762
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.762
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.762
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.752
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.752
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.752
LOC100065893 Equus caballus ENSECAG00000017929 N 0.752
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.743
MKRN1 Felis catus ENSFCAG00000013043 N 0.743
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.743
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.743
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.743
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.733
Q6GLT5 Xenopus laevis Q6GLT5 N 0.724
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.724
AAH74368 Xenopus laevis AAH74368 N 0.724
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.714
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.714