CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Pa_1_24010
(
Podospora anserina
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Pa_1_24010
T21905_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pa_1_24010
KH
229
278
FVKRRQRILGQNGTTLKALELLTQTYILVHGNTVSVMGPFKGLKEVRRVV
Links
Other
KH
family RBPs
Other
Podospora anserina
RBPs
118 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCU07041
Neurospora crassa
NCU07041
N
1.000
estExt_Genewise1Plus.C_120457
Neurospora discreta
estExt_Genewise1Plus.C_120457
N
1.000
estExt_Genewise1.C_250056
Neurospora tetrasperma
estExt_Genewise1.C_250056
N
1.000
estExt_Genewise1.C_80450
Myceliophthora thermophila
estExt_Genewise1.C_80450
N
0.980
estExt_fgenesh2_pm.C_40064
Thielavia terrestris
estExt_fgenesh2_pm.C_40064
N
0.980
FGSG_06203
Fusarium graminearum
FGSG_06203
N
0.900
GLRG_02756
Colletotrichum graminicola
GLRG_02756
N
0.900
PMAA_048600
Penicillium marneffei
PMAA_048600
N
0.880
gw1.3.2120.1
Cryphonectria parasitica
gw1.3.2120.1
N
0.880
e_gw1.11.691.1
Mycosphaerella fijiensis
e_gw1.11.691.1
N
0.880
estExt_fgenesh1_pg.C_chr_50346
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_50346
N
0.880
Pc15g00270
Penicillium chrysogenum
Pc15g00270
N
0.860
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.840
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.840
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.840
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.840
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.840
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.840
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.840
BDBG_00628
Blastomyces dermatitidis
BDBG_00628
N
0.840
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.840
ATEG_01441
Aspergillus terreus
CADATEAG00000360
N
0.840
fgenesh1_pm.00866_#_279
Aspergillus carbonarius
fgenesh1_pm.00866_#_279
N
0.820
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.820
A7TFC5_VANPO
Vanderwaltozyma polyspora
A7TFC5_VANPO
N
0.820
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.820
Kwal_13011
Kluyveromyces waltii
Kwal_13011
N
0.820
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.820
FVEG_06170
Fusarium verticillioides
FVEG_06170
N
0.815
XP_002489989.1
Pichia pastoris
XP_002489989.1
N
0.808
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.800
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.800
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.800
PredSwiss_ASS2010_156.1
Pneumocystis carinii
PredSwiss_ASS2010_156.1
N
0.800
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.800
KRR1
Candida albicans
orf19.661
N
0.800
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.800
e_gwh2.2.654.1
Phanerochaete chrysosporium
e_gwh2.2.654.1
N
0.800
KLTH0F00506g
Kluyveromyces thermotolerans
KLTH0F00506g
N
0.792
mis3
Schizosaccharomyces pombe
SPBC25B2.05
N
0.780
e_gw1.35.542.1
Selaginella moellendorfii
e_gw1.35.542.1
N
0.765
AMAG_09721
Allomyces macrogynus
AMAG_09721
N
0.760
CC1G_09940
Coprinopsis cinerea
CC1G_09940
N
0.760
YALI0F30393g
Yarrowia lipolytica
YALI0F30393g
N
0.760
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.760
AMAG_07778
Allomyces macrogynus
AMAG_07778
N
0.760
estExt_fgenesh2_pg.C_210023
Monosiga brevicollis
estExt_fgenesh2_pg.C_210023
N
0.760
estExt_fgenesh3_pm.C_180006
Postia placenta
estExt_fgenesh3_pm.C_180006
N
0.760
CPAG_00706
Candida parapsilosis
CPAG_00706
N
0.760
XM_846783.1
Canis familiaris
ENSCAFG00000005665
N
0.760
fgenesh1_pm.C_scaffold_4000135
Pleurotus ostreatus
fgenesh1_pm.C_scaffold_4000135
N
0.760
Genemark.4150_g
Heterobasidion annosum
Genemark.4150_g
N
0.760
estExt_Genewise1Plus.C_250151
Melampsora laricis populina
estExt_Genewise1Plus.C_250151
N
0.760
KRR1
Erinaceus europaeus
ENSEEUG00000001466
N
0.760
e_gw1.1.3483.1
Schizophyllum commune
e_gw1.1.3483.1
N
0.760
Ame_R008803
Ailuropoda melanoleuca
Ame_R008803
N
0.760
fgenesh2_kg.4_#_366_#_2882_1_CFPN
Serpula lacrymans
fgenesh2_kg.4_#_366_#_2882_1_CFPN
N
0.760
CNBG_5932
Cryptococcus neoformans
CNBG_5932
N
0.760
PHATRDRAFT_45441
Phaeodactylum tricornutum
Phatr45441
N
0.745
ZYRO0F18458g
Zygosaccharomyces rouxii
ZYRO0F18458g
N
0.745
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.740
estExt_fgenesh2_kg.C_20554
Agaricus bisporus
estExt_fgenesh2_kg.C_20554
N
0.740
e_gw1.7.291.1
Tremella mesenterica
e_gw1.7.291.1
N
0.740
EDP43963.1
Malassezia globosa
EDP43963.1
N
0.740
eu2.Lbscf0025g00750
Laccaria bicolor
eu2.Lbscf0025g00750
N
0.740
KRR1
Spermophilus tridecemlineatus
ENSSTOG00000003620
N
0.740
KRR1
Ochotona princeps
ENSOPRG00000011858
N
0.740
LOC100050169
Equus caballus
ENSECAG00000017498
N
0.740
ENSPPYG00000004785
Pongo pygmaeus
ENSPPYG00000004785
N
0.740
XR_025480.1
Pan troglodytes
ENSPTRG00000005238
N
0.740
KRR1
Pteropus vampyrus
ENSPVAG00000000529
N
0.740
KRR1
Otolemur garnettii
ENSOGAG00000010313
N
0.740
KRR1
Oryctolagus cuniculus
ENSOCUG00000003925
N
0.740
KRR1
Homo sapiens
ENSG00000111615
N
0.740
KRR1
Macropus eugenii
ENSMEUG00000011365
N
0.740
KRR1
Macaca mulatta
ENSMMUG00000009640
N
0.740
KRR1
Monodelphis domestica
ENSMODG00000020451
N
0.740
KRR1
Felis catus
ENSFCAG00000005207
N
0.740
Krr1
Dipodomys ordii
ENSDORG00000004614
N
0.740
KRR1
Dasypus novemcinctus
ENSDNOG00000015614
N
0.740
KRR1_BOVIN
Bos taurus
ENSBTAG00000011591
N
0.740
KRR1
Tarsius syrichta
ENSTSYG00000009394
N
0.740
KRR1
Tursiops truncatus
ENSTTRG00000001661
N
0.740
UM03241
Ustilago maydis
UM03241
N
0.740
SPPG_02913
Spizellomyces punctatus
SPPG_02913
N
0.740
KRR1
Gorilla gorilla
ENSGGOG00000013596
N
0.740
KRR1
Choloepus hoffmanni
ENSCHOG00000009636
N
0.740
KRR1
Sus scrofa
ENSSSCG00000000520
N
0.740
KRR1
Sorex araneus
ENSSARG00000009967
N
0.740
LOC100407700
Callithrix jacchus
ENSCJAG00000001181
N
0.740
KRR1
Cavia porcellus
ENSCPOG00000014353
N
0.740
KRR1
Tupaia belangeri
ENSTBEG00000008145
N
0.740
ANIA_05875
Aspergillus nidulans
CADANIAG00007161
N
0.737
Q5ZKE0_CHICK
Gallus gallus
ENSGALG00000010227
N
0.725
KRR1
Meleagris gallopavo
ENSMGAG00000010844
N
0.725
PCHAS_030750
Plasmodium chabaudi
PCHAS_030750
N
0.725
KRR1
Loxodonta africana
ENSLAFG00000015986
N
0.720
MDP0000130613
Malus x domestica
MDP0000130613
N
0.720
e_gw1.10.100.1
Phycomyces blakesleeanus
e_gw1.10.100.1
N
0.720
KRR1
Danio rerio
ENSDARG00000011246
N
0.720
PTSG_07198
Salpingoeca rosetta
PTSG_07198
N
0.720
THAPSDRAFT_268598
Thalassiosira pseudonana
Thaps268598
N
0.720
estExt_fgenesh1_pg.C_70293
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_70293
N
0.720
Krr1
Mus musculus
ENSMUSG00000063334
N
0.720
krr1
Xenopus tropicalis
ENSXETG00000013312
N
0.720
Medtr5g094630
Medicago truncatula
Medtr5g094630
N
0.720
KRR1
Gasterosteus aculeatus
ENSGACG00000019481
N
0.720
MDP0000221204
Malus x domestica
MDP0000221204
N
0.720
Hrb2
Rattus norvegicus
ENSRNOG00000004035
N
0.720
An02g03350
Aspergillus niger
CADANGAG00001848
N
0.719
estExt_fgenesh4_pg.C_90052
Volvox carteri
estExt_fgenesh4_pg.C_90052
N
0.706
XP_002158002.1
Hydra magnipapillata
XP_002158002.1
N
0.700
KRR1
Vicugna pacos
ENSVPAG00000011750
N
0.700
e_gw1.1.604.1
Mucor circinelloides
e_gw1.1.604.1
N
0.700
e_gw1.07.00.268.1
Ostreococcus tauri
e_gw1.07.00.268.1
N
0.700
e_gw1.7.303.1
Ostreococcus RCC809
e_gw1.7.303.1
N
0.700
KRR1
Takifugu rubripes
ENSTRUG00000004380
N
0.700
GSPATP00022892001
Paramecium tetraurelia
GSPATP00022892001
N
0.700