CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TGGT1_008040
(
Toxoplasma gondii
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
TGGT1_008040
T20469_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TGGT1_008040
KH
175
224
FVKRRQRLVGPNGSTLKAIELLTKCYVLVQGQTVSVMGTHKGIKVVQRLV
Links
Other
KH
family RBPs
Other
Toxoplasma gondii
RBPs
84 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TGME49_062070
Toxoplasma gondii
TGME49_062070
N
1.000
NCLIV_025560
Neospora caninum
NCLIV_025560
N
1.000
TGVEG_072780
Toxoplasma gondii
TGVEG_072780
N
1.000
AMAG_09721
Allomyces macrogynus
AMAG_09721
N
0.820
AMAG_07778
Allomyces macrogynus
AMAG_07778
N
0.820
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.800
cgd3_2950
Cryptosporidium parvum
cgd3_2950
N
0.800
CNBG_5932
Cryptococcus neoformans
CNBG_5932
N
0.800
Chro.30334
Cryptosporidium hominis
Chro.30334
N
0.800
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.780
e_gw1.07.00.268.1
Ostreococcus tauri
e_gw1.07.00.268.1
N
0.780
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.780
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.780
CMU_000450
Cryptosporidium muris
CMU_000450
N
0.780
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.780
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.780
SPPG_02913
Spizellomyces punctatus
SPPG_02913
N
0.780
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.780
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.780
e_gw1.7.303.1
Ostreococcus RCC809
e_gw1.7.303.1
N
0.780
e_gwh2.2.654.1
Phanerochaete chrysosporium
e_gwh2.2.654.1
N
0.780
fgenesh1_pm.C_scaffold_4000135
Pleurotus ostreatus
fgenesh1_pm.C_scaffold_4000135
N
0.760
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.760
Kwal_13011
Kluyveromyces waltii
Kwal_13011
N
0.760
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.760
CC1G_09940
Coprinopsis cinerea
CC1G_09940
N
0.760
fgenesh2_kg.4_#_366_#_2882_1_CFPN
Serpula lacrymans
fgenesh2_kg.4_#_366_#_2882_1_CFPN
N
0.760
Genemark.4150_g
Heterobasidion annosum
Genemark.4150_g
N
0.760
A7TFC5_VANPO
Vanderwaltozyma polyspora
A7TFC5_VANPO
N
0.760
estExt_fgenesh3_pm.C_180006
Postia placenta
estExt_fgenesh3_pm.C_180006
N
0.760
e_gw1.1.604.1
Mucor circinelloides
e_gw1.1.604.1
N
0.760
estExt_fgenesh1_pg.C_70293
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_70293
N
0.760
e_gw1.1.3483.1
Schizophyllum commune
e_gw1.1.3483.1
N
0.760
eu2.Lbscf0025g00750
Laccaria bicolor
eu2.Lbscf0025g00750
N
0.760
eugene.0700010461
Ostreococcus lucimarinus
eugene.0700010461
N
0.760
EDP43963.1
Malassezia globosa
EDP43963.1
N
0.740
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.740
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.740
e_gw1.10.100.1
Phycomyces blakesleeanus
e_gw1.10.100.1
N
0.740
UM03241
Ustilago maydis
UM03241
N
0.740
RO3G_15602
Rhizopus oryzae
RO3G_15602
N
0.740
KRR1
Candida albicans
orf19.661
N
0.740
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.740
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.740
Medtr5g094630
Medicago truncatula
Medtr5g094630
N
0.740
estExt_Genewise1Plus.C_250151
Melampsora laricis populina
estExt_Genewise1Plus.C_250151
N
0.740
e_gw1.7.291.1
Tremella mesenterica
e_gw1.7.291.1
N
0.740
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.740
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.740
PredSwiss_ASS2010_156.1
Pneumocystis carinii
PredSwiss_ASS2010_156.1
N
0.740
estExt_fgenesh2_kg.C_20554
Agaricus bisporus
estExt_fgenesh2_kg.C_20554
N
0.740
KLTH0F00506g
Kluyveromyces thermotolerans
KLTH0F00506g
N
0.736
XP_002489989.1
Pichia pastoris
XP_002489989.1
N
0.731
ZYRO0F18458g
Zygosaccharomyces rouxii
ZYRO0F18458g
N
0.725
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.720
PTSG_07198
Salpingoeca rosetta
PTSG_07198
N
0.720
e_gw1.11.691.1
Mycosphaerella fijiensis
e_gw1.11.691.1
N
0.720
mis3
Schizosaccharomyces pombe
SPBC25B2.05
N
0.720
THAPSDRAFT_268598
Thalassiosira pseudonana
Thaps268598
N
0.720
CMR456C
Cyanidioschyzon merolae
CMR456C
N
0.720
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.720
FGSG_06203
Fusarium graminearum
FGSG_06203
N
0.720
GLRG_02756
Colletotrichum graminicola
GLRG_02756
N
0.720
TP02_0631
Theileria parva
TP02_0631
N
0.720
estExt_fgenesh2_pg.C_210023
Monosiga brevicollis
estExt_fgenesh2_pg.C_210023
N
0.720
fgenesh_newKGs_kg.437__12__2686076:1
Emiliania huxleyi
fgenesh_newKGs_kg.437__12__2686076:1
N
0.720
estExt_fgenesh1_pg.C_chr_50346
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_50346
N
0.720
CPAG_00706
Candida parapsilosis
CPAG_00706
N
0.720
PHATRDRAFT_45441
Phaeodactylum tricornutum
Phatr45441
N
0.706
XP_001186312.1
Strongylocentrotus purpuratus
XP_001186312.1
N
0.706
XP_786725.1
Strongylocentrotus purpuratus
XP_786725.1
N
0.706
GE15854
Drosophila yakuba
FBgn0233416
N
0.700
GK24616
Drosophila willistoni
FBgn0226576
N
0.700
MDP0000221204
Malus x domestica
MDP0000221204
N
0.700
PMAA_048600
Penicillium marneffei
PMAA_048600
N
0.700
Pc15g00270
Penicillium chrysogenum
Pc15g00270
N
0.700
MDP0000130613
Malus x domestica
MDP0000130613
N
0.700
EDO06615.1
Babesia bovis
EDO06615.1
N
0.700
dbe
Drosophila melanogaster
FBgn0020305
N
0.700
GA18062-RA
Drosophila pseudoobscura
FBgn0078070
N
0.700
GL18627
Drosophila persimilis
FBgn0156228
N
0.700
GI18007
Drosophila mojavensis
FBgn0140747
N
0.700
GG24622
Drosophila erecta
FBgn0116754
N
0.700
GJ19628
Drosophila virilis
FBgn0206770
N
0.700