estExt_fgenesh2_kg.C_20130 (Agaricus bisporus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 estExt_fgenesh2_kg.C_20130 T21673_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_kg.C_20130 KH 225 274

Links

Other KH family RBPs
Other Agaricus bisporus RBPs

219 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gwh1.2.512.1 Laccaria bicolor e_gwh1.2.512.1 N 1.000
gw1.1.2472.1 Pleurotus ostreatus gw1.1.2472.1 N 0.960
e_gw1.12.287.1 Serpula lacrymans e_gw1.12.287.1 N 0.960
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.940
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.940
e_gw1.2.2126.1 Schizophyllum commune e_gw1.2.2126.1 N 0.920
e_gw1.2.756.1 Heterobasidion annosum e_gw1.2.756.1 N 0.900
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.880
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.880
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.860
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.860
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.840
AAQ24169 Xenopus laevis AAQ24169 N 0.840
Q8AVH4 Xenopus laevis Q8AVH4 N 0.840
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.840
AAH42279 Xenopus laevis AAH42279 N 0.840
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.840
pno1 Danio rerio ENSDARG00000008502 N 0.840
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.840
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.840
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.840
AMAG_12889 Allomyces macrogynus AMAG_12889 N 0.840
AMAG_14219 Allomyces macrogynus AMAG_14219 N 0.840
estExt_Genewise1.C_260084 Melampsora laricis populina estExt_Genewise1.C_260084 N 0.840
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.840
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.840
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.820
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.820
PNO1 Homo sapiens ENSG00000115946 N 0.820
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.820
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.820
PNO1 Microcebus murinus ENSMICG00000010897 N 0.820
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.820
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.820
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.820
GP3.070330 Batrachochytrium dendrobatidis GP3.070330 N 0.820
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.820
PNO1 Canis familiaris ENSCAFG00000003256 N 0.820
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.820
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.820
e_gw1.15.315.1 Tremella mesenterica e_gw1.15.315.1 N 0.820
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.820
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.820
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.820
LOC100061904 Equus caballus ENSECAG00000011263 N 0.820
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.820
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.820
estExt_Genewise1Plus.C_250095 Phycomyces blakesleeanus estExt_Genewise1Plus.C_250095 N 0.820
PNO1 Sus scrofa ENSSSCG00000008352 N 0.820
e_gw1.8.261.1 Sporobolomyces roseus e_gw1.8.261.1 N 0.820
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.820
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.820
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.820
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.820
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.820
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.820
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.820
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.820
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.820
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.820
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.820
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.820
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.820
PNO1 Procavia capensis ENSPCAG00000016146 N 0.820
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.820
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.820
SPRG_02415 Saprolegnia parasitica SPRG_02415 N 0.800
estExt_Genewise1.C_5820041 Capitella teleta estExt_Genewise1.C_5820041 N 0.800
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.800
PTTG_01898 Puccinia triticina PTTG_01898 N 0.800
PITG_01680 Phytophthora infestans PITG_01680 N 0.800
Pno1 Mus musculus ENSMUSG00000020116 N 0.800
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.800
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.800
fgenesh1_pm.C_scaffold_5000030 Phytophthora ramorum fgenesh1_pm.C_scaffold_5000030 N 0.800
SPPG_04498 Spizellomyces punctatus SPPG_04498 N 0.800
s_468317 Phytophthora sojae s_468317 N 0.800
EFA79428.1 Polysphondylium pallidum EFA79428.1 N 0.780
SJAG_03872 Schizosaccharomyces japonicus SJAG_03872 N 0.780
estExt_fgenesh1_kg.C_140013 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_140013 N 0.780
SPOG_00402 Schizosaccharomyces cryophilus SPOG_00402 N 0.780
rbp28 Schizosaccharomyces pombe SPAC2C4.11c N 0.780
fgeneshTA2_pg.C_scaffold_14000176 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_14000176 N 0.780
estExt_fgenesh1_pg.C_190237 Phytophthora capsici estExt_fgenesh1_pg.C_190237 N 0.780
DGIL_AUG5s4501g8t1 Acyrtosiphon pisum DGIL_AUG5s4501g8t1 N 0.780
ENSCJAG00000022611 Callithrix jacchus ENSCJAG00000022611 N 0.780
3712.m00082 Tetrahymena thermophila 3712.m00082 N 0.760
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.760
ARB_00984 Arthroderma benhamiae ARB_00984 N 0.760
CNBG_1323 Cryptococcus neoformans CNBG_1323 N 0.760
BDBG_01721 Blastomyces dermatitidis BDBG_01721 N 0.760
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.760
YALI0E01122g Yarrowia lipolytica YALI0E01122g N 0.760
EDP42908.1 Malassezia globosa EDP42908.1 N 0.760
28525.m000262 Ricinus communis 28525.m000262 N 0.760
estExt_fgenesh1_pg.C_110137 Monosiga brevicollis estExt_fgenesh1_pg.C_110137 N 0.760
EAT88982.1 Phaeosphaeria nodorum EAT88982.1 N 0.760
estExt_Genewise1Plus.C_chr_70397 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_70397 N 0.760
XM_001110046.1 Macaca mulatta ENSMMUG00000003556 N 0.760
e_gwEuk.7.409.1 Ostreococcus lucimarinus e_gwEuk.7.409.1 N 0.760
Medtr3g080390 Medicago truncatula Medtr3g080390 N 0.760
EDI_198550 Entamoeba dispar EDI_198550 N 0.760
e_gw1.7.528.1 Ostreococcus RCC809 e_gw1.7.528.1 N 0.760
Scas_Contig632.19 Saccharomyces castellii Scas_Contig632.19 N 0.760
EHI_065870 Entamoeba histolytica EHI_065870 N 0.760
nasonia_NCBI_hmm120183 Nasonia vitripennis nasonia_NCBI_hmm120183 N 0.760
MCYG_07269 Microsporum canis MCYG_07269 N 0.760
MGYG_04767 Microsporum gypseum MGYG_04767 N 0.760
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.760
TESG_04215 Trichophyton tonsurans TESG_04215 N 0.760
TRV_03730 Trichophyton verrucosum TRV_03730 N 0.760
SNOG_03777 Stagonospora nodorum SNOG_03777 N 0.760
TEQG_07954 Trichophyton equinum TEQG_07954 N 0.760
TERG_01665 Trichophyton rubrum TERG_01665 N 0.760
HCAG_04100 Histoplasma capsulatum HCAG_04100 N 0.760
MDP0000136407 Malus x domestica MDP0000136407 N 0.740
MDP0000265633 Malus x domestica MDP0000265633 N 0.740
MDP0000120063 Malus x domestica MDP0000120063 N 0.740
BRADI2G52180 Brachypodium distachyon BRADI2G52180 N 0.740
e_gw1.13.100.1 Volvox carteri e_gw1.13.100.1 N 0.740
BGIOSIBCE009391 Oryza indica BGIOSIBCE009391 N 0.740
estExt_genewise1_human.C_chr_1.20929 Pichia stipitis estExt_genewise1_human.C_chr_1.20929 N 0.740
e_gw1.18.222.1 Chlorella NC64A e_gw1.18.222.1 N 0.740
cassava30594.valid.m1 Manihot esculenta cassava30594.valid.m1 N 0.740
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.740
Pc14g01220 Penicillium chrysogenum Pc14g01220 N 0.740
pno1 Dictyostelium discoideum DDB_G0287557 N 0.740
MDP0000754021 Malus x domestica MDP0000754021 N 0.740
ppa009897m Prunus persica ppa009897m N 0.740
PDK_20s1554761g001 Phoenix dactylifera PDK_20s1554761g001 N 0.740
Glyma18g08100.1 Glycine max Glyma18g08100.1 N 0.740
A7THL8_VANPO Vanderwaltozyma polyspora A7THL8_VANPO N 0.740
0700010277 Ostreococcus tauri 0700010277 N 0.740
BGIBMGA014064 Bombyx mori BGIBMGA014064 N 0.740
CAGL0K09460g Candida glabrata CAGL0K09460g N 0.740
Cd36_35296 Candida dubliniensis Cd36_35296 N 0.740
GSPATP00020703001 Paramecium tetraurelia GSPATP00020703001 N 0.740
GSPATP00021981001 Paramecium tetraurelia GSPATP00021981001 N 0.740
UM03495 Ustilago maydis UM03495 N 0.740
GRMZM2G139198 Zea mays GRMZM2G139198 N 0.740
Glyma18g08080.1 Glycine max Glyma18g08080.1 N 0.740
Glyma08g44800.1 Glycine max Glyma08g44800.1 N 0.740
27316 Aureococcus anophagefferens 27316 N 0.740
mgf006621m Mimulus guttatus mgf006621m N 0.740
GRMZM2G085005 Zea mays GRMZM2G085005 N 0.740
PK08146.1 Cannabis sativa PK08146.1 N 0.740
GID1.0042265 Dictyostelium purpureum GID1.0042265 N 0.740
SOCG_04140 Schizosaccharomyces octosporus SOCG_04140 N 0.740
orf19.7618 Candida albicans orf19.7618 N 0.740
ZYRO0D11440g Zygosaccharomyces rouxii ZYRO0D11440g N 0.740
SAKL0G03740g Lachancea kluyveri SAKL0G03740g N 0.740
ppa011086m Prunus persica ppa011086m N 0.740
PABG_01374 Paracoccidioides brasiliensis PABG_01374 N 0.740
LOC_Os03g02420 Oryza sativa LOC_Os03g02420 N 0.740
BC1G_12211 Botrytis cinerea BC1G_12211 N 0.740
CIMG_07268 Coccidioides immitis CIMG_07268 N 0.740
CTRG_05813 Candida tropicalis CTRG_05813 N 0.740
DEHA0G05258g Debaryomyces hansenii DEHA0G05258g N 0.740
CPSG_08784 Coccidioides posadasii CPSG_08784 N 0.740
CPAG_01545 Candida parapsilosis CPAG_01545 N 0.740
CLUG_01545 Candida lusitaniae CLUG_01545 N 0.740
LELG_05249 Lodderomyces elongisporus LELG_05249 N 0.740
SB03G036840 Sorghum bicolor Sb03g036840 N 0.740
LOC_Os01g57910 Oryza sativa LOC_Os01g57910 N 0.740
LmjF35.3540 Leishmania major LmjF35.3540 N 0.740
LinJ35_V3.3590 Leishmania infantum LinJ35_V3.3590 N 0.740
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.740
SS1G_04290 Sclerotinia sclerotiorum SS1G_04290 N 0.740
LbrM34_V2.3470 Leishmania braziliensis LbrM34_V2.3470 N 0.740
GK20148 Drosophila willistoni FBgn0222145 N 0.725
CMU_025600 Cryptosporidium muris CMU_025600 N 0.725
Cucsa.201760 Cucumis sativus Cucsa.201760 N 0.720
KLLA0C06446g Kluyveromyces lactis KLLA0C06446g N 0.720
e_gw1.4.614.1 Micromonas pusilla e_gw1.4.614.1 N 0.720
PDK_20s1552091g001 Phoenix dactylifera PDK_20s1552091g001 N 0.720
Cucsa.041830 Cucumis sativus Cucsa.041830 N 0.720
e_gw1.3.1059.1 Mycosphaerella fijiensis e_gw1.3.1059.1 N 0.720
23888_YOR145C Saccharomyces bayanus 23888_YOR145C N 0.720
e_gw1.226.39.1 Physcomitrella patens e_gw1.226.39.1 N 0.720
UREG_07832 Uncinocarpus reesii UREG_07832 N 0.720
LOAG_05624 Loa loa LOAG_05624 N 0.720
WUBG_12774 Wuchereria bancrofti WUBG_12774 N 0.720
GSTUMT00003923001 Tuber melanosporum GSTUMT00003923001 N 0.720
Skud_Contig1833.8 Saccharomyces kudriavzevii Skud_Contig1833.8 N 0.720
PNO1 Ashbya gossypii PNO1 N 0.720
Bm1_42995 Brugia malayi Bm1_42995 N 0.720
LjSGA_017760.2 Lotus japonicus LjSGA_017760.2 N 0.720
estExt_fgenesh5_pg.C_40050 Trichoderma reesei estExt_fgenesh5_pg.C_40050 N 0.720
PTRG_02803 Pyrenophora tritici repentis PTRG_02803 N 0.720
FGSG_01345 Fusarium graminearum FGSG_01345 N 0.720
estExt_fgenesh2_pm.C_sca_70005 Lottia gigantea estExt_fgenesh2_pm.C_sca_70005 N 0.720
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 N 0.720
PNO1 Saccharomyces cerevisiae YOR145C N 0.720
FOXG_00036 Fusarium oxysporum FOXG_00036 N 0.720
Genemark1.5719_g Coccomyxa C 169 Genemark1.5719_g N 0.720
PGUG_02960 Candida guilliermondii PGUG_02960 N 0.720
fgeneshCV_pg.C_scaffold_11000142 Chlorella vulgaris fgeneshCV_pg.C_scaffold_11000142 N 0.720
cassava7030.valid.m1 Manihot esculenta cassava7030.valid.m1 N 0.720
20872_YOR145C Saccharomyces paradoxus 20872_YOR145C N 0.720
Kwal_18864 Kluyveromyces waltii Kwal_18864 N 0.720
fgenesh1_pm.C_scaffold_14000035 Trichoderma atroviride fgenesh1_pm.C_scaffold_14000035 N 0.720
FVEG_01480 Fusarium verticillioides FVEG_01480 N 0.720
PHUM356890 Pediculus humanus PHUM356890 N 0.720
estExt_Genewise1Plus.C_91132 Trichoderma virens estExt_Genewise1Plus.C_91132 N 0.720
LmxM34.3540 Leishmania mexicana LmxM34.3540 N 0.720
KLTH0G02574g Kluyveromyces thermotolerans KLTH0G02574g N 0.720
GA11169-RA Drosophila pseudoobscura FBgn0071224 N 0.706
GJ15820 Drosophila virilis FBgn0203007 N 0.706
GH12628 Drosophila grimshawi FBgn0120107 N 0.706
20359_YOR145C Saccharomyces mikatae 20359_YOR145C N 0.706
ATEG_07413 Aspergillus terreus CADATEAG00001505 N 0.700
THAPSDRAFT_35041 Thalassiosira pseudonana Thaps35041 N 0.700
estExt_Genewise1Plus.C_10659 Myceliophthora thermophila estExt_Genewise1Plus.C_10659 N 0.700
CJA15618 Caenorhabditis japonica CJA15618 N 0.700
fgenesh1_pg.C_scaffold_107000027 Daphnia pulex fgenesh1_pg.C_scaffold_107000027 N 0.700
fgenesh_newKGs_pm.139__21 Emiliania huxleyi fgenesh_newKGs_pm.139__21 N 0.700
TvY486_0905560 Trypanosoma vivax TvY486_0905560 N 0.700
EDO07242.1 Babesia bovis EDO07242.1 N 0.700
PHATRDRAFT_9929 Phaeodactylum tricornutum Phatr9929 N 0.700