LOC_Os05g40290 (Oryza sativa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 LOC_Os05g40290 T20142_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os05g40290.1 KH 138 222
LOC_Os05g40290.2 KH 138 222
LOC_Os05g40290.3 KH 89 173

Links

Other KH family RBPs
Other Oryza sativa RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 1.000
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.953
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.918
GRMZM2G093006 Zea mays GRMZM2G093006 N 0.906
SB09G023640 Sorghum bicolor Sb09g023640 N 0.882
AC218972.3_FG007 Zea mays AC218972.3_FG007 N 0.871
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.871
SB03G038070 Sorghum bicolor Sb03g038070 N 0.871
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.847
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.800
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.793
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.788
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.765
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.765
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.753
BGIOSIBCE004076 Oryza indica BGIOSIBCE004076 N 0.742
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.741
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.741
ppa009701m Prunus persica ppa009701m N 0.729
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.729
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.729
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.729
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.729
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.718
MDP0000665847 Malus x domestica MDP0000665847 N 0.718
PK22673.1 Cannabis sativa PK22673.1 N 0.718
MDP0000186494 Malus x domestica MDP0000186494 N 0.718
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.718
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.718
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.718
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.718
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.706
27955.m000377 Ricinus communis 27955.m000377 N 0.706
SB02G006770 Sorghum bicolor Sb02g006770 N 0.706
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.706
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.706
PK23097.1 Cannabis sativa PK23097.1 N 0.706
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.706