MDP0000665847 (Malus x domestica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 MDP0000665847 T21866_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000665847 KH 144 216

Links

Other KH family RBPs
Other Malus x domestica RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000186494 Malus x domestica MDP0000186494 N 1.000
PK23097.1 Cannabis sativa PK23097.1 N 0.986
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.973
ppa009701m Prunus persica ppa009701m N 0.973
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.973
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.973
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.973
MDP0000119110 Malus x domestica MDP0000119110 N 0.973
MDP0000501473 Malus x domestica MDP0000501473 N 0.973
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.973
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.960
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.960
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.959
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.947
27955.m000377 Ricinus communis 27955.m000377 N 0.946
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.932
mgf005196m Mimulus guttatus mgf005196m N 0.920
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.919
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.918
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.908
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.905
PK22673.1 Cannabis sativa PK22673.1 N 0.893
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.882
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.867
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.865
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.863
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.853
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.853
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.853
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.853
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.846
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.846
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.843
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.838
SB02G006770 Sorghum bicolor Sb02g006770 N 0.838
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.824
mgf011994m Mimulus guttatus mgf011994m N 0.811
SB01G003680 Sorghum bicolor Sb01g003680 N 0.797
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.797
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.795
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.795
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.795
29945.m000086 Ricinus communis 29945.m000086 N 0.795
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.784
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.781
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.767
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.753
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.747
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.747
GSVIVG00024534001 Vitis vinifera GSVIVG00024534001 N 0.743
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.738
SB09G023640 Sorghum bicolor Sb09g023640 N 0.735
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.732
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.718
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.718
SB03G038070 Sorghum bicolor Sb03g038070 N 0.718
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.716
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.711
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.711
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.711
GRMZM2G093006 Zea mays GRMZM2G093006 N 0.706
AC218972.3_FG007 Zea mays AC218972.3_FG007 N 0.706