LOC_Os01g60260 (Oryza sativa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 LOC_Os01g60260 T20131_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os01g60260.1 KH 138 218
LOC_Os01g60260.2 KH 138 218

Links

Other KH family RBPs
Other Oryza sativa RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G093006 Zea mays GRMZM2G093006 N 0.882
AC218972.3_FG007 Zea mays AC218972.3_FG007 N 0.882
SB03G038070 Sorghum bicolor Sb03g038070 N 0.882
BGIOSIBCE004076 Oryza indica BGIOSIBCE004076 N 0.865
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.847
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.847
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.847
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.835
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.821
SB09G023640 Sorghum bicolor Sb09g023640 N 0.821
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.815
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.802
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.802
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.802
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.765
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.765
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.753
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.747
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.741
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.732
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.732
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.732
SB02G006770 Sorghum bicolor Sb02g006770 N 0.728
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.728
MDP0000501473 Malus x domestica MDP0000501473 N 0.720
PK23097.1 Cannabis sativa PK23097.1 N 0.720
MDP0000119110 Malus x domestica MDP0000119110 N 0.720
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.720
SB01G003680 Sorghum bicolor Sb01g003680 N 0.720
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.716
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.716
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.714
MDP0000186494 Malus x domestica MDP0000186494 N 0.711
MDP0000665847 Malus x domestica MDP0000665847 N 0.711
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.707
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.707
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.706
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.704
29945.m000086 Ricinus communis 29945.m000086 N 0.704
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.702
27955.m000377 Ricinus communis 27955.m000377 N 0.702