SS1G_03893 (Sclerotinia sclerotiorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SS1G_03893 T30969_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_03893 RRM 137 207

Links

Other RRM family RBPs
Other Sclerotinia sclerotiorum RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_04453 Botrytis cinerea BC1G_04453 N 0.944
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.746
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.746
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.746
Pc22g17020 Penicillium chrysogenum Pc22g17020 N 0.746
ANIA_04346 Aspergillus nidulans CADANIAG00006114 N 0.746
TESG_01475 Trichophyton tonsurans TESG_01475 N 0.732
TEQG_06916 Trichophyton equinum TEQG_06916 N 0.732
TERG_07689 Trichophyton rubrum TERG_07689 N 0.732
estExt_fgenesh1_pg.C_90140 Trichoderma atroviride estExt_fgenesh1_pg.C_90140 N 0.732
TRV_00034 Trichophyton verrucosum TRV_00034 N 0.732
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.732
An04g00680 Aspergillus niger CADANGAG00003776 N 0.732
ARB_01674 Arthroderma benhamiae ARB_01674 N 0.732
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.732
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.732
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.732
MCYG_01275 Microsporum canis MCYG_01275 N 0.718
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.718
MGYG_01823 Microsporum gypseum MGYG_01823 N 0.718
FVEG_11271 Fusarium verticillioides FVEG_11271 N 0.718
FOXG_13842 Fusarium oxysporum FOXG_13842 N 0.718
FGSG_04392 Fusarium graminearum FGSG_04392 N 0.718
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.718
e_gw1.11.592.1 Nectria haematococca e_gw1.11.592.1 N 0.718
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.718
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.718
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.718
e_gw1.1.997.1 Trichoderma reesei e_gw1.1.997.1 N 0.718
e_gw1.17.425.1 Trichoderma virens e_gw1.17.425.1 N 0.718
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.718
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.704
ACLA_045660 Aspergillus clavatus CADACLAG00004652 N 0.704
PMAA_027560 Penicillium marneffei PMAA_027560 N 0.704
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.704
BDBG_06195 Blastomyces dermatitidis BDBG_06195 N 0.704
fgenesh1_pg.C_chr_12000358 Mycosphaerella graminicola fgenesh1_pg.C_chr_12000358 N 0.704