CSTF2 (Choloepus hoffmanni)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCHOG00000012803 T35335_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000011340 RRM 1 68

Links

Other RRM family RBPs
Other Choloepus hoffmanni RBPs

129 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CSTF2 Tupaia belangeri ENSTBEG00000010029 N 1.000
ENSOANG00000004208 Ornithorhynchus anatinus ENSOANG00000004208 N 0.971
Ame_R018329 Ailuropoda melanoleuca Ame_R018329 N 0.971
CSTF2 Vicugna pacos ENSVPAG00000006466 N 0.971
CSTF2 Myotis lucifugus ENSMLUG00000004598 N 0.958
CSTF2 Macaca mulatta ENSMMUG00000013008 N 0.958
ENSMEUG00000011186 Macropus eugenii ENSMEUG00000011186 N 0.958
ENSMEUG00000007875 Macropus eugenii ENSMEUG00000007875 N 0.958
ENSMODG00000011785 Monodelphis domestica ENSMODG00000011785 N 0.958
CSTF2 Microcebus murinus ENSMICG00000014121 N 0.958
CSTF2 Taeniopygia guttata ENSTGUG00000002253 N 0.958
ENSPPYG00000020541 Pongo pygmaeus ENSPPYG00000020541 N 0.958
CSTF2 Pan troglodytes ENSPTRG00000022090 N 0.958
CSTF2 Sus scrofa ENSSSCG00000012486 N 0.958
CSTF2 Oryctolagus cuniculus ENSOCUG00000010468 N 0.958
CSTF2 Tursiops truncatus ENSTTRG00000013556 N 0.958
Cstf2 Mus musculus ENSMUSG00000031256 N 0.958
CSTF2 Loxodonta africana ENSLAFG00000000474 N 0.958
AAH80037 Xenopus laevis AAH80037 N 0.958
ENSACAG00000004388 Anolis carolinensis ENSACAG00000004388 N 0.958
CSTF2_BOVIN Bos taurus ENSBTAG00000003547 N 0.958
AAH41291 Xenopus laevis AAH41291 N 0.958
AAB50269 Xenopus laevis AAB50269 N 0.958
CSTF2 Callithrix jacchus ENSCJAG00000004422 N 0.958
CSTF2 Cavia porcellus ENSCPOG00000015255 N 0.958
CSTF2 Gorilla gorilla ENSGGOG00000022267 N 0.958
CSTF2 Felis catus ENSFCAG00000007000 N 0.958
CSTF2 Canis familiaris ENSCAFG00000017551 N 0.958
cstf2 Xenopus tropicalis ENSXETG00000009642 N 0.958
CSTF2 Homo sapiens ENSG00000101811 N 0.958
Q5ZLS0_CHICK Gallus gallus ENSGALG00000006760 N 0.958
Ame_R018612 Ailuropoda melanoleuca Ame_R018612 N 0.944
ENSSSCG00000009884 Sus scrofa ENSSSCG00000009884 N 0.944
CSTF2T Sorex araneus ENSSARG00000002013 N 0.944
ENSSSCG00000010430 Sus scrofa ENSSSCG00000010430 N 0.944
CSTF2T Tursiops truncatus ENSTTRG00000003341 N 0.944
CSTF2 Tetraodon nigroviridis ENSTNIG00000016860 N 0.944
CSTF2T Canis familiaris ENSCAFG00000015567 N 0.944
CSTF2T Spermophilus tridecemlineatus ENSSTOG00000005624 N 0.944
CSTF2 Takifugu rubripes ENSTRUG00000004323 N 0.944
D3ZKA4_RAT Rattus norvegicus ENSRNOG00000022436 N 0.944
ENSGGOG00000022117 Gorilla gorilla ENSGGOG00000022117 N 0.944
ENSGGOG00000026139 Gorilla gorilla ENSGGOG00000026139 N 0.944
CSTF2T Loxodonta africana ENSLAFG00000002058 N 0.944
CSTF2 Gasterosteus aculeatus ENSGACG00000017326 N 0.944
CSTF2T Homo sapiens ENSG00000177613 N 0.944
cstf2 Danio rerio ENSDARG00000044009 N 0.944
CSTF2T Callithrix jacchus ENSCJAG00000005033 N 0.944
CSTF2T Felis catus ENSFCAG00000013011 N 0.944
CSTF2T Myotis lucifugus ENSMLUG00000011187 N 0.944
CSTF2T Macaca mulatta ENSMMUG00000010845 N 0.944
ENSPPYG00000002441 Pongo pygmaeus ENSPPYG00000002441 N 0.944
CSTF2T Pan troglodytes ENSPTRG00000002510 N 0.944
CSTF2T Pteropus vampyrus ENSPVAG00000006274 N 0.944
CSTF2T Procavia capensis ENSPCAG00000000046 N 0.944
CSTF2 Oryzias latipes ENSORLG00000001380 N 0.944
Cstf2t Mus musculus ENSMUSG00000053536 N 0.944
ENSCPOG00000004195 Cavia porcellus ENSCPOG00000004195 N 0.944
CSTF2T Choloepus hoffmanni ENSCHOG00000011888 N 0.944
CSTF2 Echinops telfairi ENSETEG00000004931 N 0.930
CSTF2 Equus caballus ENSECAG00000009325 N 0.915
CSTF2T Oryctolagus cuniculus ENSOCUG00000004647 N 0.915
e_gw.65.105.1 Branchiostoma floridae e_gw.65.105.1 N 0.873
e_gw.65.110.1 Branchiostoma floridae e_gw.65.110.1 N 0.873
XP_001181887.1 Strongylocentrotus purpuratus XP_001181887.1 N 0.870
XP_001186020.1 Strongylocentrotus purpuratus XP_001186020.1 N 0.870
ISCW015573 Ixodes scapularis ISCW015573 N 0.859
e_gw.312.28.1 Nematostella vectensis e_gw.312.28.1 N 0.845
DGIL_AUG5s2502g11t1 Acyrtosiphon pisum DGIL_AUG5s2502g11t1 N 0.845
ENSCSAVG00000010770 Ciona savignyi ENSCSAVG00000010770 N 0.831
amel4_ncbi_hmm3649 Apis mellifera amel4_ncbi_hmm3649 N 0.831
BGIBMGA006476 Bombyx mori BGIBMGA006476 N 0.831
nasonia_NCBI_hmm235054 Nasonia vitripennis nasonia_NCBI_hmm235054 N 0.831
DGIL_AUG5s12011g4t1 Acyrtosiphon pisum DGIL_AUG5s12011g4t1 N 0.831
CPIJ012662 Culex quinquefasciatus CPIJ012662 N 0.817
CpipJ_CPIJ012662 Culex pipiens CpipJ_CPIJ012662 N 0.817
AGAP010918 Anopheles gambiae AGAP010918 N 0.817
fgeneshTA2_pg.C_scaffold_5000618 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_5000618 N 0.803
AAEL013869 Aedes aegypti AAEL013869 N 0.803
ENSCING00000017649 Ciona intestinalis ENSCING00000017649 N 0.803
112541 Helobdella robusta 112541 N 0.789
PASA_GEN_0100181 Daphnia pulex PASA_GEN_0100181 N 0.789
XP_002159315.1 Hydra magnipapillata XP_002159315.1 N 0.775
GJ10336 Drosophila virilis FBgn0197622 N 0.775
GG22991 Drosophila erecta FBgn0115148 N 0.775
28644.m000926 Ricinus communis 28644.m000926 N 0.775
GH18352 Drosophila grimshawi FBgn0125820 N 0.775
GI23336 Drosophila mojavensis FBgn0146063 N 0.775
SNAPOd2T00016915001 Oikopleura dioica SNAPOd2T00016915001 N 0.775
GM17877 Drosophila sechellia FBgn0172784 N 0.775
GF16912 Drosophila ananassae FBgn0093932 N 0.775
GL24357 Drosophila persimilis FBgn0161947 N 0.775
GK14167 Drosophila willistoni FBgn0216173 N 0.775
GD19237 Drosophila simulans FBgn0190742 N 0.775
GA20525-RA Drosophila pseudoobscura FBgn0080519 N 0.775
GE25546 Drosophila yakuba FBgn0242611 N 0.775
CstF-64 Drosophila melanogaster FBgn0027841 N 0.775
MDP0000208337 Malus x domestica MDP0000208337 N 0.771
GSVIVG00013670001 Vitis vinifera GSVIVG00013670001 N 0.761
PK22244.1 Cannabis sativa PK22244.1 N 0.761
AGAP004414 Anopheles gambiae AGAP004414 N 0.761
MDP0000283046 Malus x domestica MDP0000283046 N 0.761
Glyma10g36350.1 Glycine max Glyma10g36350.1 N 0.761
Glyma20g31220.1 Glycine max Glyma20g31220.1 N 0.761
mgf012202m Mimulus guttatus mgf012202m N 0.761
mgf002767m Mimulus guttatus mgf002767m N 0.761
Cucsa.364140 Cucumis sativus Cucsa.364140 N 0.761
LjSGA_018671.1 Lotus japonicus LjSGA_018671.1 N 0.761
MDP0000142436 Malus x domestica MDP0000142436 N 0.761
ppa004010m Prunus persica ppa004010m N 0.761
BGIOSIBCE033690 Oryza indica BGIOSIBCE033690 N 0.757
gw1.36.17.1 Physcomitrella patens gw1.36.17.1 N 0.754
CSTF64 Arabidopsis thaliana AT1G71800-TAIR-G N 0.746
BRADI4G24180 Brachypodium distachyon BRADI4G24180 N 0.746
XM_002887343.1 Arabidopsis lyrata Al_scaffold_0002_1857 N 0.746
LOC_Os11g07490 Oryza sativa LOC_Os11g07490 N 0.746
SB05G004860 Sorghum bicolor Sb05g004860 N 0.746
GRMZM2G174919 Zea mays GRMZM2G174919 N 0.746
estExt_Genewise1.C_550102 Capitella teleta estExt_Genewise1.C_550102 N 0.746
LOC100062520 Equus caballus ENSECAG00000004701 N 0.735
fgenesh1_pg.C_scaffold_74000038 Phytophthora ramorum fgenesh1_pg.C_scaffold_74000038 N 0.732
SPRG_10503 Saprolegnia parasitica SPRG_10503 N 0.732
PHUM441150 Pediculus humanus PHUM441150 N 0.732
gw1.20.80.1 Selaginella moellendorfii gw1.20.80.1 N 0.732
s_451557 Phytophthora sojae s_451557 N 0.732
EFA81339.1 Polysphondylium pallidum EFA81339.1 N 0.729
estExt_fgenesh1_pm.C_80118 Phytophthora capsici estExt_fgenesh1_pm.C_80118 N 0.718
SPPG_01899 Spizellomyces punctatus SPPG_01899 N 0.718
PITG_14249 Phytophthora infestans PITG_14249 N 0.718