XP_001181887.1 (Strongylocentrotus purpuratus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 XP_001181887.1 T58879_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001181887.1 RRM 9 77

Links

Other RRM family RBPs
Other Strongylocentrotus purpuratus RBPs

128 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_001186020.1 Strongylocentrotus purpuratus XP_001186020.1 N 1.000
CSTF2 Tupaia belangeri ENSTBEG00000010029 N 0.870
CSTF2 Choloepus hoffmanni ENSCHOG00000012803 N 0.870
BGIBMGA006476 Bombyx mori BGIBMGA006476 N 0.859
ENSOANG00000004208 Ornithorhynchus anatinus ENSOANG00000004208 N 0.857
Ame_R018329 Ailuropoda melanoleuca Ame_R018329 N 0.857
CSTF2 Vicugna pacos ENSVPAG00000006466 N 0.857
ENSACAG00000004388 Anolis carolinensis ENSACAG00000004388 N 0.845
Cstf2 Mus musculus ENSMUSG00000031256 N 0.845
CSTF2 Loxodonta africana ENSLAFG00000000474 N 0.845
CSTF2 Gorilla gorilla ENSGGOG00000022267 N 0.845
CSTF2_BOVIN Bos taurus ENSBTAG00000003547 N 0.845
CSTF2 Canis familiaris ENSCAFG00000017551 N 0.845
CSTF2 Pan troglodytes ENSPTRG00000022090 N 0.845
CSTF2 Felis catus ENSFCAG00000007000 N 0.845
CSTF2 Oryctolagus cuniculus ENSOCUG00000010468 N 0.845
ENSPPYG00000020541 Pongo pygmaeus ENSPPYG00000020541 N 0.845
Q5ZLS0_CHICK Gallus gallus ENSGALG00000006760 N 0.845
ENSMODG00000011785 Monodelphis domestica ENSMODG00000011785 N 0.845
CSTF2 Cavia porcellus ENSCPOG00000015255 N 0.845
CSTF2 Callithrix jacchus ENSCJAG00000004422 N 0.845
ENSMEUG00000007875 Macropus eugenii ENSMEUG00000007875 N 0.845
e_gw.65.105.1 Branchiostoma floridae e_gw.65.105.1 N 0.845
e_gw.312.28.1 Nematostella vectensis e_gw.312.28.1 N 0.845
cstf2 Xenopus tropicalis ENSXETG00000009642 N 0.845
e_gw.65.110.1 Branchiostoma floridae e_gw.65.110.1 N 0.845
AAH80037 Xenopus laevis AAH80037 N 0.845
AAB50269 Xenopus laevis AAB50269 N 0.845
AAH41291 Xenopus laevis AAH41291 N 0.845
CSTF2 Sus scrofa ENSSSCG00000012486 N 0.845
DGIL_AUG5s2502g11t1 Acyrtosiphon pisum DGIL_AUG5s2502g11t1 N 0.845
CSTF2 Taeniopygia guttata ENSTGUG00000002253 N 0.845
CSTF2 Homo sapiens ENSG00000101811 N 0.845
ENSMEUG00000011186 Macropus eugenii ENSMEUG00000011186 N 0.845
CSTF2 Microcebus murinus ENSMICG00000014121 N 0.845
CSTF2 Tursiops truncatus ENSTTRG00000013556 N 0.845
CSTF2 Myotis lucifugus ENSMLUG00000004598 N 0.845
CSTF2 Macaca mulatta ENSMMUG00000013008 N 0.845
Cstf2t Mus musculus ENSMUSG00000053536 N 0.831
CSTF2T Sorex araneus ENSSARG00000002013 N 0.831
CSTF2 Tetraodon nigroviridis ENSTNIG00000016860 N 0.831
CSTF2T Spermophilus tridecemlineatus ENSSTOG00000005624 N 0.831
CSTF2 Takifugu rubripes ENSTRUG00000004323 N 0.831
CSTF2T Tursiops truncatus ENSTTRG00000003341 N 0.831
Ame_R018612 Ailuropoda melanoleuca Ame_R018612 N 0.831
ENSSSCG00000010430 Sus scrofa ENSSSCG00000010430 N 0.831
ENSSSCG00000009884 Sus scrofa ENSSSCG00000009884 N 0.831
CSTF2T Pan troglodytes ENSPTRG00000002510 N 0.831
CSTF2T Procavia capensis ENSPCAG00000000046 N 0.831
CSTF2T Pteropus vampyrus ENSPVAG00000006274 N 0.831
D3ZKA4_RAT Rattus norvegicus ENSRNOG00000022436 N 0.831
CSTF2T Macaca mulatta ENSMMUG00000010845 N 0.831
CSTF2 Oryzias latipes ENSORLG00000001380 N 0.831
ENSPPYG00000002441 Pongo pygmaeus ENSPPYG00000002441 N 0.831
CSTF2T Canis familiaris ENSCAFG00000015567 N 0.831
CSTF2T Callithrix jacchus ENSCJAG00000005033 N 0.831
ENSCPOG00000004195 Cavia porcellus ENSCPOG00000004195 N 0.831
CpipJ_CPIJ012662 Culex pipiens CpipJ_CPIJ012662 N 0.831
CPIJ012662 Culex quinquefasciatus CPIJ012662 N 0.831
CSTF2T Myotis lucifugus ENSMLUG00000011187 N 0.831
amel4_ncbi_hmm3649 Apis mellifera amel4_ncbi_hmm3649 N 0.831
DGIL_AUG5s12011g4t1 Acyrtosiphon pisum DGIL_AUG5s12011g4t1 N 0.831
nasonia_NCBI_hmm235054 Nasonia vitripennis nasonia_NCBI_hmm235054 N 0.831
cstf2 Danio rerio ENSDARG00000044009 N 0.831
CSTF2T Choloepus hoffmanni ENSCHOG00000011888 N 0.831
CSTF2T Loxodonta africana ENSLAFG00000002058 N 0.831
ENSGGOG00000026139 Gorilla gorilla ENSGGOG00000026139 N 0.831
CSTF2 Gasterosteus aculeatus ENSGACG00000017326 N 0.831
ENSGGOG00000022117 Gorilla gorilla ENSGGOG00000022117 N 0.831
CSTF2T Homo sapiens ENSG00000177613 N 0.831
CSTF2T Felis catus ENSFCAG00000013011 N 0.831
CSTF2 Echinops telfairi ENSETEG00000004931 N 0.817
AAEL013869 Aedes aegypti AAEL013869 N 0.817
AGAP010918 Anopheles gambiae AGAP010918 N 0.803
CSTF2T Oryctolagus cuniculus ENSOCUG00000004647 N 0.803
CSTF2 Equus caballus ENSECAG00000009325 N 0.803
ISCW015573 Ixodes scapularis ISCW015573 N 0.803
GI23336 Drosophila mojavensis FBgn0146063 N 0.789
GH18352 Drosophila grimshawi FBgn0125820 N 0.789
GL24357 Drosophila persimilis FBgn0161947 N 0.789
GJ10336 Drosophila virilis FBgn0197622 N 0.789
GG22991 Drosophila erecta FBgn0115148 N 0.789
GE25546 Drosophila yakuba FBgn0242611 N 0.789
GK14167 Drosophila willistoni FBgn0216173 N 0.789
GM17877 Drosophila sechellia FBgn0172784 N 0.789
GD19237 Drosophila simulans FBgn0190742 N 0.789
ENSCING00000017649 Ciona intestinalis ENSCING00000017649 N 0.789
CstF-64 Drosophila melanogaster FBgn0027841 N 0.789
GF16912 Drosophila ananassae FBgn0093932 N 0.789
GA20525-RA Drosophila pseudoobscura FBgn0080519 N 0.789
PASA_GEN_0100181 Daphnia pulex PASA_GEN_0100181 N 0.775
fgeneshTA2_pg.C_scaffold_5000618 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_5000618 N 0.775
ENSCSAVG00000010770 Ciona savignyi ENSCSAVG00000010770 N 0.775
28644.m000926 Ricinus communis 28644.m000926 N 0.732
MDP0000208337 Malus x domestica MDP0000208337 N 0.729
Glyma20g31220.1 Glycine max Glyma20g31220.1 N 0.718
Glyma10g36350.1 Glycine max Glyma10g36350.1 N 0.718
mgf002767m Mimulus guttatus mgf002767m N 0.718
mgf012202m Mimulus guttatus mgf012202m N 0.718
XP_002159315.1 Hydra magnipapillata XP_002159315.1 N 0.718
MDP0000283046 Malus x domestica MDP0000283046 N 0.718
ppa004010m Prunus persica ppa004010m N 0.718
MDP0000142436 Malus x domestica MDP0000142436 N 0.718
LjSGA_018671.1 Lotus japonicus LjSGA_018671.1 N 0.718
PITG_14249 Phytophthora infestans PITG_14249 N 0.718
estExt_fgenesh1_pm.C_80118 Phytophthora capsici estExt_fgenesh1_pm.C_80118 N 0.718
s_451557 Phytophthora sojae s_451557 N 0.718
estExt_Genewise1.C_550102 Capitella teleta estExt_Genewise1.C_550102 N 0.718
SNAPOd2T00016915001 Oikopleura dioica SNAPOd2T00016915001 N 0.718
fgenesh1_pg.C_scaffold_74000038 Phytophthora ramorum fgenesh1_pg.C_scaffold_74000038 N 0.718
PHUM441150 Pediculus humanus PHUM441150 N 0.718
GSVIVG00013670001 Vitis vinifera GSVIVG00013670001 N 0.718
Cucsa.364140 Cucumis sativus Cucsa.364140 N 0.718
112541 Helobdella robusta 112541 N 0.718
SPRG_10503 Saprolegnia parasitica SPRG_10503 N 0.718
AGAP004414 Anopheles gambiae AGAP004414 N 0.718
PK22244.1 Cannabis sativa PK22244.1 N 0.718
BGIOSIBCE033690 Oryza indica BGIOSIBCE033690 N 0.714
EFA81339.1 Polysphondylium pallidum EFA81339.1 N 0.714
gw1.36.17.1 Physcomitrella patens gw1.36.17.1 N 0.710
BRADI4G24180 Brachypodium distachyon BRADI4G24180 N 0.704
XM_002887343.1 Arabidopsis lyrata Al_scaffold_0002_1857 N 0.704
CSTF64 Arabidopsis thaliana AT1G71800-TAIR-G N 0.704
GRMZM2G174919 Zea mays GRMZM2G174919 N 0.704
SPPG_01899 Spizellomyces punctatus SPPG_01899 N 0.704
gw1.20.80.1 Selaginella moellendorfii gw1.20.80.1 N 0.704
SB05G004860 Sorghum bicolor Sb05g004860 N 0.704
LOC_Os11g07490 Oryza sativa LOC_Os11g07490 N 0.704