HNRNPM (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000013783 T42341_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000035215 RRM 29 99
ENSTRUP00000035215 RRM 174 243
ENSTRUP00000035215 RRM 597 665
ENSTRUP00000035216 RRM 29 99
ENSTRUP00000035216 RRM 123 192
ENSTRUP00000035216 RRM 546 614
ENSTRUP00000035217 RRM 29 99
ENSTRUP00000035217 RRM 174 243
ENSTRUP00000035217 RRM 534 602
ENSTRUP00000035218 RRM 4 74
ENSTRUP00000035218 RRM 149 218
ENSTRUP00000035218 RRM 472 540
ENSTRUP00000035219 RRM 4 74
ENSTRUP00000035219 RRM 149 218
ENSTRUP00000035219 RRM 446 514

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

68 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPM Tetraodon nigroviridis ENSTNIG00000015530 N 0.976
HNRNPM Gasterosteus aculeatus ENSGACG00000010265 N 0.938
HNRNPM Oryzias latipes ENSORLG00000005400 N 0.919
HNRNPM Callithrix jacchus ENSCJAG00000010802 N 0.791
Q5ZL80_CHICK Gallus gallus ENSGALG00000000377 N 0.788
HNRNPM Cavia porcellus ENSCPOG00000015182 N 0.787
ENSOCUG00000000552 Oryctolagus cuniculus ENSOCUG00000000552 N 0.787
HNRNPM Gorilla gorilla ENSGGOG00000003498 N 0.787
HNRNPM Tursiops truncatus ENSTTRG00000009769 N 0.787
HNRNPM Homo sapiens ENSG00000099783 N 0.787
HNRNPM Echinops telfairi ENSETEG00000019712 N 0.787
HNRNPM Equus caballus ENSECAG00000023868 N 0.787
HNRNPM Choloepus hoffmanni ENSCHOG00000013627 N 0.787
HNRNPM Canis familiaris ENSCAFG00000018524 N 0.787
HNRNPM Loxodonta africana ENSLAFG00000013603 N 0.787
Ame_R017061 Ailuropoda melanoleuca Ame_R017061 N 0.787
HNRNPM Sus scrofa ENSSSCG00000013602 N 0.787
HNRNPM Macaca mulatta ENSMMUG00000018806 N 0.787
XM_001365870.1 Monodelphis domestica ENSMODG00000003801 N 0.787
Hnrpm Rattus norvegicus ENSRNOG00000007921 N 0.787
ENSPPYG00000009506 Pongo pygmaeus ENSPPYG00000009506 N 0.787
Q3SYX2_BOVIN Bos taurus ENSBTAG00000021039 N 0.787
HNRNPM Pan troglodytes ENSPTRG00000010424 N 0.787
ENSOCUG00000024611 Oryctolagus cuniculus ENSOCUG00000024611 N 0.787
Hnrnpm Mus musculus ENSMUSG00000059208 N 0.782
HNRNPM Myotis lucifugus ENSMLUG00000006696 N 0.782
HNRNPM Procavia capensis ENSPCAG00000009678 N 0.782
HNRNPM Meleagris gallopavo ENSMGAG00000000700 N 0.778
HNRNPM Tupaia belangeri ENSTBEG00000008718 N 0.773
HNRNPM Microcebus murinus ENSMICG00000002532 N 0.763
HNRNPM Sorex araneus ENSSARG00000000267 N 0.759
AAI34826 Xenopus laevis AAI34826 N 0.758
HNRNPM Ochotona princeps ENSOPRG00000001943 N 0.745
myef2 Xenopus tropicalis ENSXETG00000018412 N 0.738
HNRNPM Spermophilus tridecemlineatus ENSSTOG00000008112 N 0.733
MYEF2 Oryzias latipes ENSORLG00000002730 N 0.729
HNRNPM Dasypus novemcinctus ENSDNOG00000012157 N 0.726
HNRNPM Macropus eugenii ENSMEUG00000004789 N 0.726
MYEF2 Loxodonta africana ENSLAFG00000012990 N 0.724
MYEF2 Anolis carolinensis ENSACAG00000004806 N 0.724
AAI08588 Xenopus laevis AAI08588 N 0.724
MYEF2 Pan troglodytes ENSPTRG00000007042 N 0.719
MYEF2 Canis familiaris ENSCAFG00000014008 N 0.719
ENSPPYG00000006452 Pongo pygmaeus ENSPPYG00000006452 N 0.719
A6QQP0_BOVIN Bos taurus ENSBTAG00000008771 N 0.719
MYEF2 Tursiops truncatus ENSTTRG00000008076 N 0.719
Ame_R005511 Ailuropoda melanoleuca Ame_R005511 N 0.719
MYEF2 Meleagris gallopavo ENSMGAG00000006915 N 0.719
MYEF2 Vicugna pacos ENSVPAG00000004721 N 0.719
MYEF2 Procavia capensis ENSPCAG00000016660 N 0.719
MYEF2 Oryctolagus cuniculus ENSOCUG00000013043 N 0.719
Q5ZHY2_CHICK Gallus gallus ENSGALG00000004905 N 0.719
MYEF2 Macaca mulatta ENSMMUG00000018834 N 0.719
MYEF2 Homo sapiens ENSG00000104177 N 0.719
MYEF2 Gasterosteus aculeatus ENSGACG00000016759 N 0.719
LOC100070256 Equus caballus ENSECAG00000005741 N 0.719
MYEF2 Gorilla gorilla ENSGGOG00000014968 N 0.714
ENSDORG00000015835 Dipodomys ordii ENSDORG00000015835 N 0.714
Myef2 Rattus norvegicus ENSRNOG00000005258 N 0.714
MYEF2 Taeniopygia guttata ENSTGUG00000007130 N 0.714
MYEF2 Callithrix jacchus ENSCJAG00000001875 N 0.714
MYEF2 Takifugu rubripes ENSTRUG00000016967 N 0.714
MYEF2 Tetraodon nigroviridis ENSTNIG00000009526 N 0.711
MYEF2 Sus scrofa ENSSSCG00000004661 N 0.710
Myef2 Mus musculus ENSMUSG00000027201 N 0.710
myef2 Danio rerio ENSDARG00000059398 N 0.710
HNRNPM Otolemur garnettii ENSOGAG00000003234 N 0.701