mgf005336m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf005336m T53621_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf005336m RRM 18 85
mgf005336m RRM 115 183

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
mgf014445m Mimulus guttatus mgf014445m N 0.869
GSVIVG00001961001 Vitis vinifera GSVIVG00001961001 N 0.796
PK28889.1 Cannabis sativa PK28889.1 N 0.781
ppa009298m Prunus persica ppa009298m N 0.774
29650.m000268 Ricinus communis 29650.m000268 N 0.766
cassava23841.valid.m1 Manihot esculenta cassava23841.valid.m1 N 0.759
GSVIVG00019674001 Vitis vinifera GSVIVG00019674001 N 0.752
PK04894.1 Cannabis sativa PK04894.1 N 0.745
Glyma04g40750.1 Glycine max Glyma04g40750.1 N 0.745
ppa006808m Prunus persica ppa006808m N 0.745
Glyma15g40060.1 Glycine max Glyma15g40060.1 N 0.745
mgf012896m Mimulus guttatus mgf012896m N 0.737
Medtr3g122880 Medicago truncatula Medtr3g122880 N 0.737
estExt_Genewise1.C_1960042 Physcomitrella patens estExt_Genewise1.C_1960042 N 0.737
e_gw1.62.48.1 Physcomitrella patens e_gw1.62.48.1 N 0.737
chr3.CM0059.50.nd Lotus japonicus chr3.CM0059.50.nd N 0.730
Glyma06g14030.1 Glycine max Glyma06g14030.1 N 0.730
Glyma04g40760.1 Glycine max Glyma04g40760.1 N 0.730
Glyma06g14050.1 Glycine max Glyma06g14050.1 N 0.730
PK12463.1 Cannabis sativa PK12463.1 N 0.730
Glyma08g18810.1 Glycine max Glyma08g18810.1 N 0.730
gw1.29.636.1 Selaginella moellendorfii gw1.29.636.1 N 0.723
cassava37979.valid.m1 Manihot esculenta cassava37979.valid.m1 N 0.723
29485.m000140 Ricinus communis 29485.m000140 N 0.723
cassava38063.valid.m1 Manihot esculenta cassava38063.valid.m1 N 0.723
cassava37978.valid.m1 Manihot esculenta cassava37978.valid.m1 N 0.723
cassava38065.valid.m1 Manihot esculenta cassava38065.valid.m1 N 0.723
gw1.10.957.1 Selaginella moellendorfii gw1.10.957.1 N 0.723
cassava41364.m1 Manihot esculenta cassava41364.m1 N 0.723
cassava41363.m1 Manihot esculenta cassava41363.m1 N 0.723
cassava38064.valid.m1 Manihot esculenta cassava38064.valid.m1 N 0.723
LOC_Os08g02330 Oryza sativa LOC_Os08g02330 N 0.723
mgf013366m Mimulus guttatus mgf013366m N 0.723
XM_002872481.1 Arabidopsis lyrata fgenesh2_kg.6__3042__AT4G10610.1 N 0.723
Medtr3g122920 Medicago truncatula Medtr3g122920 N 0.723
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.723
BGIOSIBCE026288 Oryza indica BGIOSIBCE026288 N 0.723
MDP0000233630 Malus x domestica MDP0000233630 N 0.723
XM_002893696.1 Arabidopsis lyrata fgenesh2_kg.1__3419__AT1G32790.2 N 0.723
CID11 Arabidopsis thaliana AT1G32790-TAIR-G N 0.723
CID10 Arabidopsis thaliana AT3G49390-TAIR-G N 0.715
cassava43127.valid.m1 Manihot esculenta cassava43127.valid.m1 N 0.715
XM_002877626.1 Arabidopsis lyrata fgenesh2_kg.5__1290__AT3G49390.2 N 0.715
30068.m002593 Ricinus communis 30068.m002593 N 0.715
GRMZM2G069102 Zea mays GRMZM2G069102 N 0.715
XM_002894411.1 Arabidopsis lyrata Al_scaffold_0001_4812 N 0.708
ATRBP37 Arabidopsis thaliana AT4G10610-TAIR-G N 0.708
XM_002882834.1 Arabidopsis lyrata fgenesh2_kg.3__1570__AT3G14450.1 N 0.708
PDK_20s1822231g001 Phoenix dactylifera PDK_20s1822231g001 N 0.701
CID8 Arabidopsis thaliana AT1G53650-TAIR-G N 0.701
BRADI3G13740 Brachypodium distachyon BRADI3G13740 N 0.701
LOC_Os01g11120 Oryza sativa LOC_Os01g11120 N 0.701
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.701
SB07G001560 Sorghum bicolor Sb07g001560 N 0.701
Cucsa.273320 Cucumis sativus Cucsa.273320 N 0.701
CID9 Arabidopsis thaliana AT3G14450-TAIR-G N 0.701