ENSCAFG00000017608 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSCAFG00000017608 T077664_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
ENSCAFG00000017608
M06013_2.00		 Canis familiaris NGURGKKU JPLE
Sasse et al.(2025)
RM_Can.fam_ENSCAFG00000017608 		0.012

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M00809_2.00 		Homo sapiens UAGUG RNA-Bind-n-Seq
Dominguez et al.(2018)
0.792
SFPQ
M00808_2.00 		Homo sapiens WGUAAN RNA-Bind-n-Seq
Dominguez et al.(2018)
0.792
SFPQ
M00506_2.00 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
0.792
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
0.792
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.012
(88.92%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000030908 RRM 267 343
ENSCAFP00000030908 RRM 340 406

RNA contacting residues

Links

Other RRM family RBPs
Other Canis familiaris RBPs

63 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCJAG00000001431 Callithrix jacchus ENSCJAG00000001431 I 0.878
ENSCPOG00000015018 Cavia porcellus ENSCPOG00000015018 I 0.878
ENSCSAG00000001082 Chlorocebus sabaeus ENSCSAG00000001082 I 0.878
SFPQ Dasypus novemcinctus ENSDNOG00000049454 I 0.878
ENSECAG00000000642 Equus caballus ENSECAG00000000642 I 0.878
SFPQ Echinops telfairi ENSETEG00000001095 I 0.878
ENSFCAG00000031287 Felis catus ENSFCAG00000031287 I 0.878
SFPQ Homo sapiens ENSG00000116560 D 0.878
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.878
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.878
ENSMICG00000011755 Microcebus murinus ENSMICG00000011755 I 0.878
Sfpq Mus musculus ENSMUSG00000028820 I 0.878
ENSNLEG00000010868 Nomascus leucogenys ENSNLEG00000010868 I 0.878
ENSOARG00000019439 Ovis aries ENSOARG00000019439 I 0.878
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.878
SFPQ Otolemur garnettii ENSOGAG00000027710 I 0.878
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.878
ENSPANG00000005380 Papio anubis ENSPANG00000005380 I 0.878
SFPQ Procavia capensis ENSPCAG00000006164 I 0.878
ENSPPYG00000001560 Pongo abelii ENSPPYG00000001560 I 0.878
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.878
Sfpq Rattus norvegicus ENSRNOG00000058461 I 0.878
ENSSTOG00000014004 Ictidomys tridecemlineatus ENSSTOG00000014004 I 0.878
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.878
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.878
ENSP00000349748-D1 Bos grunniens ENSP00000349748-D1 I 0.878
ENSAMEG00000000815 Ailuropoda melanoleuca ENSAMEG00000000815 I 0.878
SFPQ Bos taurus ENSBTAG00000016328 I 0.878
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.878
SFPQ Anolis carolinensis ENSACAG00000013307 I 0.877
Myotis_brandtii_SFPQ_10028873 Myotis brandtii Myotis_brandtii_SFPQ_10028873 I 0.872
ENSMLUG00000027090 Myotis lucifugus ENSMLUG00000027090 I 0.865
Pvit_19348 Pogona vitticeps Pvit_19348 I 0.865
SFPQ Gallus gallus ENSGALG00000002514 I 0.863
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.858
SFPQ Monodelphis domestica ENSMODG00000017937 I 0.858
ENSPSIG00000011494 Pelodiscus sinensis ENSPSIG00000011494 I 0.858
ENSSHAG00000016107 Sarcophilus harrisii ENSSHAG00000016107 I 0.858
Alligator_sinensis_CCG014919.3 Alligator sinensis Alligator_sinensis_CCG014919.3 I 0.858
ENSCAFG00000018271 Canis familiaris ENSCAFG00000018271 I 0.857
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.851
ENSTGUG00000001722 Taeniopygia guttata ENSTGUG00000001722 I 0.851
Aan_R015520 Calypte anna Aan_R015520 I 0.851
Afo_R013931 Aptenodytes forsteri Afo_R013931 I 0.851
Brh_R010044 Buceros rhinoceros Brh_R010044 I 0.851
Cmyd_10015354 Chelonia mydas Cmyd_10015354 I 0.851
Gfo_R008467 Geospiza fortis Gfo_R008467 I 0.851
Tal_R009770 Tyto alba Tal_R009770 I 0.851
ENSAPLG00000003643 Anas platyrhynchos ENSAPLG00000003643 I 0.851
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.845
ENSTSYG00000009311 Tarsius syrichta ENSTSYG00000009311 I 0.836
SFPQ Pteropus vampyrus ENSPVAG00000001865 I 0.831
sfpq Xenopus tropicalis XB-GENE-5968416 I 0.784
ENSLACG00000014728 Latimeria chalumnae ENSLACG00000014728 I 0.780
SFPQ Macaca mulatta ENSMMUG00000019154 I 0.774
ENSLOCG00000001067 Lepisosteus oculatus ENSLOCG00000001067 I 0.770
sfpq Takifugu rubripes ENSTRUG00000003783 I 0.770
sfpq Tetraodon nigroviridis ENSTNIG00000011331 I 0.752
ENSGMOG00000011950 Gadus morhua ENSGMOG00000011950 I 0.735
ENSAMXG00000011538 Astyanax mexicanus ENSAMXG00000011538 I 0.723
sfpq Gasterosteus aculeatus ENSGACG00000002034 I 0.720
ENSGMOG00000011957 Gadus morhua ENSGMOG00000011957 I 0.706
ENSCHOG00000009131 Choloepus hoffmanni ENSCHOG00000009131 I 0.701