ENSTSYG00000009311 (Tarsius syrichta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSTSYG00000009311 T088682_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
ENSTSYG00000009311
M26727_2.00		 Tarsius syrichta NGURGKKU JPLE
Sasse et al.(2025)
RM_Tar.syr_ENSTSYG00000009311 		0.012

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M00809_2.00 		Homo sapiens UAGUG RNA-Bind-n-Seq
Dominguez et al.(2018)
0.912
SFPQ
M00808_2.00 		Homo sapiens WGUAAN RNA-Bind-n-Seq
Dominguez et al.(2018)
0.912
SFPQ
M00506_2.00 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
0.912
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
0.912
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.012
(89.14%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTSYP00000008552 RRM 237 314
ENSTSYP00000008552 RRM 311 374

RNA contacting residues

Links

Other RRM family RBPs
Other Tarsius syrichta RBPs

114 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.918
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.918
ENSP00000349748-D1 Bos grunniens ENSP00000349748-D1 I 0.918
ENSAMEG00000000815 Ailuropoda melanoleuca ENSAMEG00000000815 I 0.918
SFPQ Bos taurus ENSBTAG00000016328 I 0.918
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.918
ENSCJAG00000001431 Callithrix jacchus ENSCJAG00000001431 I 0.918
ENSCPOG00000015018 Cavia porcellus ENSCPOG00000015018 I 0.918
ENSCSAG00000001082 Chlorocebus sabaeus ENSCSAG00000001082 I 0.918
SFPQ Dasypus novemcinctus ENSDNOG00000049454 I 0.918
ENSECAG00000000642 Equus caballus ENSECAG00000000642 I 0.918
SFPQ Echinops telfairi ENSETEG00000001095 I 0.918
ENSFCAG00000031287 Felis catus ENSFCAG00000031287 I 0.918
SFPQ Homo sapiens ENSG00000116560 D 0.918
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.918
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.918
ENSMICG00000011755 Microcebus murinus ENSMICG00000011755 I 0.918
Sfpq Mus musculus ENSMUSG00000028820 I 0.918
ENSNLEG00000010868 Nomascus leucogenys ENSNLEG00000010868 I 0.918
ENSOARG00000019439 Ovis aries ENSOARG00000019439 I 0.918
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.918
SFPQ Otolemur garnettii ENSOGAG00000027710 I 0.918
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.918
ENSPANG00000005380 Papio anubis ENSPANG00000005380 I 0.918
SFPQ Procavia capensis ENSPCAG00000006164 I 0.918
ENSPPYG00000001560 Pongo abelii ENSPPYG00000001560 I 0.918
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.918
Sfpq Rattus norvegicus ENSRNOG00000058461 I 0.918
ENSSTOG00000014004 Ictidomys tridecemlineatus ENSSTOG00000014004 I 0.918
Myotis_brandtii_SFPQ_10028873 Myotis brandtii Myotis_brandtii_SFPQ_10028873 I 0.912
ENSMLUG00000027090 Myotis lucifugus ENSMLUG00000027090 I 0.905
SFPQ Anolis carolinensis ENSACAG00000013307 I 0.903
Pvit_19348 Pogona vitticeps Pvit_19348 I 0.898
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.898
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.898
SFPQ Monodelphis domestica ENSMODG00000017937 I 0.898
ENSPSIG00000011494 Pelodiscus sinensis ENSPSIG00000011494 I 0.898
ENSSHAG00000016107 Sarcophilus harrisii ENSSHAG00000016107 I 0.898
SFPQ Gallus gallus ENSGALG00000002514 I 0.897
Alligator_sinensis_CCG014919.3 Alligator sinensis Alligator_sinensis_CCG014919.3 I 0.891
ENSCAFG00000018271 Canis familiaris ENSCAFG00000018271 I 0.890
Aan_R015520 Calypte anna Aan_R015520 I 0.884
Afo_R013931 Aptenodytes forsteri Afo_R013931 I 0.884
Brh_R010044 Buceros rhinoceros Brh_R010044 I 0.884
Cmyd_10015354 Chelonia mydas Cmyd_10015354 I 0.884
Gfo_R008467 Geospiza fortis Gfo_R008467 I 0.884
Tal_R009770 Tyto alba Tal_R009770 I 0.884
ENSAPLG00000003643 Anas platyrhynchos ENSAPLG00000003643 I 0.884
ENSTGUG00000001722 Taeniopygia guttata ENSTGUG00000001722 I 0.884
SFPQ Pteropus vampyrus ENSPVAG00000001865 I 0.871
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.871
SFPQ Macaca mulatta ENSMMUG00000019154 I 0.845
ENSCAFG00000017608 Canis familiaris ENSCAFG00000017608 I 0.836
sfpq Xenopus tropicalis XB-GENE-5968416 I 0.816
sfpq Takifugu rubripes ENSTRUG00000003783 I 0.810
ENSLACG00000014728 Latimeria chalumnae ENSLACG00000014728 I 0.805
ENSLOCG00000001067 Lepisosteus oculatus ENSLOCG00000001067 I 0.789
sfpq Tetraodon nigroviridis ENSTNIG00000011331 I 0.783
ENSAMXG00000011538 Astyanax mexicanus ENSAMXG00000011538 I 0.755
ENSGMOG00000011950 Gadus morhua ENSGMOG00000011950 I 0.753
sfpq Gasterosteus aculeatus ENSGACG00000002034 I 0.752
ENSXMAG00000016391 Xiphophorus maculatus ENSXMAG00000016391 I 0.736
ENSONIG00000017737 Oreochromis niloticus ENSONIG00000017737 I 0.734
ENSPFOG00000003127 Poecilia formosa ENSPFOG00000003127 I 0.730
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 0.729
ENSBTAP00000005134-D1 Bos grunniens ENSBTAP00000005134-D1 I 0.729
PSPC1 Bos taurus ENSBTAG00000003934 I 0.729
Pspc1 Dipodomys ordii ENSDORG00000016050 I 0.729
PSPC1 Erinaceus europaeus ENSEEUG00000011288 I 0.729
ENSOARG00000014163 Ovis aries ENSOARG00000014163 I 0.729
PSPC1 Sus scrofa ENSSSCG00000009569 I 0.729
Pvit_12920 Pogona vitticeps Pvit_12920 I 0.728
ENSGMOG00000011957 Gadus morhua ENSGMOG00000011957 I 0.724
ENSAMEG00000017420 Ailuropoda melanoleuca ENSAMEG00000017420 I 0.722
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.722
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.722
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.722
PSPC1 Dasypus novemcinctus ENSDNOG00000011078 I 0.722
PSPC1 Felis catus ENSFCAG00000027841 I 0.722
PSPC1 Homo sapiens ENSG00000121390 I 0.722
PSPC1 Gorilla gorilla ENSGGOG00000003414 I 0.722
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.722
ENSMEUG00000000476 Macropus eugenii ENSMEUG00000000476 I 0.722
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.722
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.722
PSPC1 Monodelphis domestica ENSMODG00000008029 I 0.722
ENSMPUG00000013347 Mustela putorius furo ENSMPUG00000013347 I 0.722
Pspc1 Mus musculus ENSMUSG00000021938 I 0.722
ENSNLEG00000001294 Nomascus leucogenys ENSNLEG00000001294 I 0.722
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.722
PSPC1 Otolemur garnettii ENSOGAG00000012643 I 0.722
ENSPANG00000001992 Papio anubis ENSPANG00000001992 I 0.722
ENSPPYG00000005186 Pongo abelii ENSPPYG00000005186 I 0.722
ENSPSIG00000005168 Pelodiscus sinensis ENSPSIG00000005168 I 0.722
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.722
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.722
PSPC1 Sorex araneus ENSSARG00000000888 I 0.722
ENSSHAG00000004696 Sarcophilus harrisii ENSSHAG00000004696 I 0.722
ENSSTOG00000026833 Ictidomys tridecemlineatus ENSSTOG00000026833 I 0.722
sfpq Oryzias latipes ENSORLG00000007459 I 0.722
Aan_R001274 Calypte anna Aan_R001274 I 0.721
Afo_R008576 Aptenodytes forsteri Afo_R008576 I 0.721
Brh_R000965 Buceros rhinoceros Brh_R000965 I 0.721
Ogr05221 Ophisaurus gracilis Ogr05221 I 0.721
Tal_R009732 Tyto alba Tal_R009732 I 0.721
pspc1 Xenopus tropicalis XB-GENE-492866 I 0.721
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.721
ENSFALG00000008750 Ficedula albicollis ENSFALG00000008750 I 0.721
PSPC1 Gallus gallus ENSGALG00000017142 I 0.721
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.721
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.715
sfpq Danio rerio ENSDARG00000011564 I 0.706
ENSAMXG00000015717 Astyanax mexicanus ENSAMXG00000015717 I 0.701
ENSLACG00000010762 Latimeria chalumnae ENSLACG00000010762 I 0.701