pspc1 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSTRUG00000011335 T088516_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
pspc1
M26583_2.00		 Takifugu rubripes GURGKKU JPLE
Sasse et al.(2025)
RM_Tak.rub_ENSTRUG00000011335 		0.113

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.113
(81.35%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000028608 RRM 81 157
ENSTRUP00000028608 RRM 155 220
ENSTRUP00000028609 RRM 17 93
ENSTRUP00000028609 RRM 91 156

RNA contacting residues

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
pspc1 Tetraodon nigroviridis ENSTNIG00000010358 I 0.875
ENSONIG00000012010 Oreochromis niloticus ENSONIG00000012010 I 0.833
ENSORLG00000004232 Oryzias latipes ENSORLG00000004232 I 0.795
pspc1 Danio rerio ENSDARG00000006621 I 0.785
ENSAMXG00000015717 Astyanax mexicanus ENSAMXG00000015717 I 0.778
ENSLOCG00000010832 Lepisosteus oculatus ENSLOCG00000010832 I 0.764
pspc1 Gasterosteus aculeatus ENSGACG00000014901 I 0.757
ENSPFOG00000003362 Poecilia formosa ENSPFOG00000003362 I 0.750
ENSGMOG00000015074 Gadus morhua ENSGMOG00000015074 I 0.745
ENSXMAG00000007929 Xiphophorus maculatus ENSXMAG00000007929 I 0.743
pspc1 Xenopus tropicalis XB-GENE-492866 I 0.714
ENSAMEG00000017420 Ailuropoda melanoleuca ENSAMEG00000017420 I 0.708
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.708
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.708
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.708
PSPC1 Dasypus novemcinctus ENSDNOG00000011078 I 0.708
PSPC1 Felis catus ENSFCAG00000027841 I 0.708
PSPC1 Homo sapiens ENSG00000121390 I 0.708
PSPC1 Gorilla gorilla ENSGGOG00000003414 I 0.708
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.708
ENSMEUG00000000476 Macropus eugenii ENSMEUG00000000476 I 0.708
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.708
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.708
PSPC1 Monodelphis domestica ENSMODG00000008029 I 0.708
ENSMPUG00000013347 Mustela putorius furo ENSMPUG00000013347 I 0.708
Pspc1 Mus musculus ENSMUSG00000021938 I 0.708
ENSNLEG00000001294 Nomascus leucogenys ENSNLEG00000001294 I 0.708
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.708
PSPC1 Otolemur garnettii ENSOGAG00000012643 I 0.708
ENSPANG00000001992 Papio anubis ENSPANG00000001992 I 0.708
ENSPPYG00000005186 Pongo abelii ENSPPYG00000005186 I 0.708
ENSPSIG00000005168 Pelodiscus sinensis ENSPSIG00000005168 I 0.708
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.708
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.708
PSPC1 Sorex araneus ENSSARG00000000888 I 0.708
ENSSHAG00000004696 Sarcophilus harrisii ENSSHAG00000004696 I 0.708
ENSSTOG00000026833 Ictidomys tridecemlineatus ENSSTOG00000026833 I 0.708
ENSLACG00000010762 Latimeria chalumnae ENSLACG00000010762 I 0.707
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 0.701
ENSBTAP00000005134-D1 Bos grunniens ENSBTAP00000005134-D1 I 0.701
PSPC1 Bos taurus ENSBTAG00000003934 I 0.701
Pspc1 Dipodomys ordii ENSDORG00000016050 I 0.701
PSPC1 Erinaceus europaeus ENSEEUG00000011288 I 0.701
ENSOARG00000014163 Ovis aries ENSOARG00000014163 I 0.701
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.701
PSPC1 Sus scrofa ENSSSCG00000009569 I 0.701
Aan_R001274 Calypte anna Aan_R001274 I 0.701
Afo_R008576 Aptenodytes forsteri Afo_R008576 I 0.701
Brh_R000965 Buceros rhinoceros Brh_R000965 I 0.701
Ogr05221 Ophisaurus gracilis Ogr05221 I 0.701
Tal_R009732 Tyto alba Tal_R009732 I 0.701
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.701
ENSFALG00000008750 Ficedula albicollis ENSFALG00000008750 I 0.701
PSPC1 Gallus gallus ENSGALG00000017142 I 0.701
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.701