ENSONIG00000012010 (Oreochromis niloticus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSONIG00000012010 T084883_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
ENSONIG00000012010
M18815_2.00		 Oreochromis niloticus NGUDGKKU JPLE
Sasse et al.(2025)
RM_Ore.nil_ENSONIG00000012010 		0.092

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
RBM28
M00069_2.00 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.287
(13.31%)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.092
(84.59%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000015118 RRM 83 160
ENSONIP00000015118 RRM 157 222

RNA contacting residues

Links

Other RRM family RBPs
Other Oreochromis niloticus RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSORLG00000004232 Oryzias latipes ENSORLG00000004232 I 0.842
pspc1 Takifugu rubripes ENSTRUG00000011335 I 0.833
pspc1 Gasterosteus aculeatus ENSGACG00000014901 I 0.826
ENSPFOG00000003362 Poecilia formosa ENSPFOG00000003362 I 0.818
ENSXMAG00000007929 Xiphophorus maculatus ENSXMAG00000007929 I 0.811
pspc1 Tetraodon nigroviridis ENSTNIG00000010358 I 0.806
ENSAMXG00000015717 Astyanax mexicanus ENSAMXG00000015717 I 0.806
ENSLOCG00000010832 Lepisosteus oculatus ENSLOCG00000010832 I 0.799
pspc1 Danio rerio ENSDARG00000006621 I 0.792
ENSLACG00000010762 Latimeria chalumnae ENSLACG00000010762 I 0.776
ENSGMOG00000015074 Gadus morhua ENSGMOG00000015074 I 0.772
pspc1 Xenopus tropicalis XB-GENE-492866 I 0.762
ENSPANG00000001992 Papio anubis ENSPANG00000001992 I 0.757
ENSPPYG00000005186 Pongo abelii ENSPPYG00000005186 I 0.757
ENSPSIG00000005168 Pelodiscus sinensis ENSPSIG00000005168 I 0.757
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.757
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.757
PSPC1 Sorex araneus ENSSARG00000000888 I 0.757
ENSSHAG00000004696 Sarcophilus harrisii ENSSHAG00000004696 I 0.757
ENSSTOG00000026833 Ictidomys tridecemlineatus ENSSTOG00000026833 I 0.757
ENSAMEG00000017420 Ailuropoda melanoleuca ENSAMEG00000017420 I 0.757
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.757
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.757
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.757
PSPC1 Dasypus novemcinctus ENSDNOG00000011078 I 0.757
PSPC1 Felis catus ENSFCAG00000027841 I 0.757
PSPC1 Homo sapiens ENSG00000121390 I 0.757
PSPC1 Gorilla gorilla ENSGGOG00000003414 I 0.757
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.757
ENSMEUG00000000476 Macropus eugenii ENSMEUG00000000476 I 0.757
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.757
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.757
PSPC1 Monodelphis domestica ENSMODG00000008029 I 0.757
ENSMPUG00000013347 Mustela putorius furo ENSMPUG00000013347 I 0.757
Pspc1 Mus musculus ENSMUSG00000021938 I 0.757
ENSNLEG00000001294 Nomascus leucogenys ENSNLEG00000001294 I 0.757
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.757
PSPC1 Otolemur garnettii ENSOGAG00000012643 I 0.757
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.750
PSPC1 Sus scrofa ENSSSCG00000009569 I 0.750
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 0.750
ENSBTAP00000005134-D1 Bos grunniens ENSBTAP00000005134-D1 I 0.750
PSPC1 Bos taurus ENSBTAG00000003934 I 0.750
Pspc1 Dipodomys ordii ENSDORG00000016050 I 0.750
PSPC1 Erinaceus europaeus ENSEEUG00000011288 I 0.750
ENSOARG00000014163 Ovis aries ENSOARG00000014163 I 0.750
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.748
Aan_R001274 Calypte anna Aan_R001274 I 0.748
Afo_R008576 Aptenodytes forsteri Afo_R008576 I 0.748
Brh_R000965 Buceros rhinoceros Brh_R000965 I 0.748
Ogr05221 Ophisaurus gracilis Ogr05221 I 0.748
Tal_R009732 Tyto alba Tal_R009732 I 0.748
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.748
ENSFALG00000008750 Ficedula albicollis ENSFALG00000008750 I 0.748
PSPC1 Gallus gallus ENSGALG00000017142 I 0.748
Pvit_12920 Pogona vitticeps Pvit_12920 I 0.735
Alligator_sinensis_CCG002824.1 Alligator sinensis Alligator_sinensis_CCG002824.1 I 0.732
nono Danio rerio ENSDARG00000020482 I 0.708