Aan_R001274 (Calypte anna)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 Aan_R001274 T117203_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
Aan_R001274
M05513_2.00		 Calypte anna NGURGKKK JPLE
Sasse et al.(2025)
RM_Cal.ann_Aan_R001274 		0.068

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M00809_2.00 		Homo sapiens UAGUG RNA-Bind-n-Seq
Dominguez et al.(2018)
0.776
SFPQ
M00808_2.00 		Homo sapiens WGUAAN RNA-Bind-n-Seq
Dominguez et al.(2018)
0.776
SFPQ
M00506_2.00 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
0.776
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
0.776
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.068
(89.52%)

RNA Binding Domains

Protein ID Domain From To Sequence
Aan_R001274 RRM 18 95
Aan_R001274 RRM 92 160

RNA contacting residues

Links

Other RRM family RBPs
Other Calypte anna RBPs

130 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Afo_R008576 Aptenodytes forsteri Afo_R008576 I 1.000
Brh_R000965 Buceros rhinoceros Brh_R000965 I 1.000
Ogr05221 Ophisaurus gracilis Ogr05221 I 1.000
Tal_R009732 Tyto alba Tal_R009732 I 1.000
PSPC1 Anolis carolinensis ENSACAG00000002093 I 1.000
ENSFALG00000008750 Ficedula albicollis ENSFALG00000008750 I 1.000
PSPC1 Gallus gallus ENSGALG00000017142 I 1.000
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 1.000
Pvit_12920 Pogona vitticeps Pvit_12920 I 0.986
Alligator_sinensis_CCG002824.1 Alligator sinensis Alligator_sinensis_CCG002824.1 I 0.973
ENSAMEG00000017420 Ailuropoda melanoleuca ENSAMEG00000017420 I 0.966
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.966
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.966
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.966
PSPC1 Dasypus novemcinctus ENSDNOG00000011078 I 0.966
PSPC1 Felis catus ENSFCAG00000027841 I 0.966
PSPC1 Homo sapiens ENSG00000121390 I 0.966
PSPC1 Gorilla gorilla ENSGGOG00000003414 I 0.966
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.966
ENSMEUG00000000476 Macropus eugenii ENSMEUG00000000476 I 0.966
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.966
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.966
PSPC1 Monodelphis domestica ENSMODG00000008029 I 0.966
ENSMPUG00000013347 Mustela putorius furo ENSMPUG00000013347 I 0.966
Pspc1 Mus musculus ENSMUSG00000021938 I 0.966
ENSNLEG00000001294 Nomascus leucogenys ENSNLEG00000001294 I 0.966
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.966
PSPC1 Otolemur garnettii ENSOGAG00000012643 I 0.966
ENSPANG00000001992 Papio anubis ENSPANG00000001992 I 0.966
ENSPPYG00000005186 Pongo abelii ENSPPYG00000005186 I 0.966
ENSPSIG00000005168 Pelodiscus sinensis ENSPSIG00000005168 I 0.966
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.966
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.966
PSPC1 Sorex araneus ENSSARG00000000888 I 0.966
ENSSHAG00000004696 Sarcophilus harrisii ENSSHAG00000004696 I 0.966
ENSSTOG00000026833 Ictidomys tridecemlineatus ENSSTOG00000026833 I 0.966
ENSBTAP00000005134-D1 Bos grunniens ENSBTAP00000005134-D1 I 0.959
PSPC1 Bos taurus ENSBTAG00000003934 I 0.959
Pspc1 Dipodomys ordii ENSDORG00000016050 I 0.959
PSPC1 Erinaceus europaeus ENSEEUG00000011288 I 0.959
ENSOARG00000014163 Ovis aries ENSOARG00000014163 I 0.959
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.959
PSPC1 Sus scrofa ENSSSCG00000009569 I 0.959
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 0.959
pspc1 Xenopus tropicalis XB-GENE-492866 I 0.905
ENSLACG00000010762 Latimeria chalumnae ENSLACG00000010762 I 0.905
ENSLOCG00000010832 Lepisosteus oculatus ENSLOCG00000010832 I 0.850
ENSGMOG00000015074 Gadus morhua ENSGMOG00000015074 I 0.837
ENSCAFG00000007359 Canis familiaris ENSCAFG00000007359 I 0.824
ENSAMXG00000015717 Astyanax mexicanus ENSAMXG00000015717 I 0.810
pspc1 Danio rerio ENSDARG00000006621 I 0.810
sfpq Takifugu rubripes ENSTRUG00000003783 I 0.803
Aan_R015520 Calypte anna Aan_R015520 I 0.782
Afo_R013931 Aptenodytes forsteri Afo_R013931 I 0.782
Brh_R010044 Buceros rhinoceros Brh_R010044 I 0.782
Gfo_R008467 Geospiza fortis Gfo_R008467 I 0.782
Myotis_brandtii_SFPQ_10028873 Myotis brandtii Myotis_brandtii_SFPQ_10028873 I 0.782
Tal_R009770 Tyto alba Tal_R009770 I 0.782
ENSAPLG00000003643 Anas platyrhynchos ENSAPLG00000003643 I 0.782
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.782
ENSMLUG00000027090 Myotis lucifugus ENSMLUG00000027090 I 0.782
SFPQ Monodelphis domestica ENSMODG00000017937 I 0.782
ENSSHAG00000016107 Sarcophilus harrisii ENSSHAG00000016107 I 0.782
ENSTGUG00000001722 Taeniopygia guttata ENSTGUG00000001722 I 0.782
Alligator_sinensis_CCG014919.3 Alligator sinensis Alligator_sinensis_CCG014919.3 I 0.776
ENSP00000349748-D1 Bos grunniens ENSP00000349748-D1 I 0.776
sfpq Xenopus tropicalis XB-GENE-5968416 I 0.776
ENSAMEG00000000815 Ailuropoda melanoleuca ENSAMEG00000000815 I 0.776
SFPQ Bos taurus ENSBTAG00000016328 I 0.776
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.776
ENSCJAG00000001431 Callithrix jacchus ENSCJAG00000001431 I 0.776
ENSCPOG00000015018 Cavia porcellus ENSCPOG00000015018 I 0.776
ENSCSAG00000001082 Chlorocebus sabaeus ENSCSAG00000001082 I 0.776
SFPQ Dasypus novemcinctus ENSDNOG00000049454 I 0.776
ENSECAG00000000642 Equus caballus ENSECAG00000000642 I 0.776
SFPQ Echinops telfairi ENSETEG00000001095 I 0.776
ENSFCAG00000031287 Felis catus ENSFCAG00000031287 I 0.776
SFPQ Homo sapiens ENSG00000116560 D 0.776
SFPQ Gallus gallus ENSGALG00000002514 I 0.776
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.776
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.776
ENSMICG00000011755 Microcebus murinus ENSMICG00000011755 I 0.776
Sfpq Mus musculus ENSMUSG00000028820 I 0.776
ENSNLEG00000010868 Nomascus leucogenys ENSNLEG00000010868 I 0.776
ENSOARG00000019439 Ovis aries ENSOARG00000019439 I 0.776
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.776
SFPQ Otolemur garnettii ENSOGAG00000027710 I 0.776
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.776
ENSORLG00000004232 Oryzias latipes ENSORLG00000004232 I 0.776
ENSPANG00000005380 Papio anubis ENSPANG00000005380 I 0.776
SFPQ Procavia capensis ENSPCAG00000006164 I 0.776
ENSPPYG00000001560 Pongo abelii ENSPPYG00000001560 I 0.776
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.776
Sfpq Rattus norvegicus ENSRNOG00000058461 I 0.776
ENSSTOG00000014004 Ictidomys tridecemlineatus ENSSTOG00000014004 I 0.776
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.776
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.776
sfpq Gasterosteus aculeatus ENSGACG00000002034 I 0.772
Cmyd_10015354 Chelonia mydas Cmyd_10015354 I 0.769
Pvit_19348 Pogona vitticeps Pvit_19348 I 0.769
ENSOANG00000011381 Ornithorhynchus anatinus ENSOANG00000011381 N 0.769
ENSPSIG00000011494 Pelodiscus sinensis ENSPSIG00000011494 I 0.769
sfpq Tetraodon nigroviridis ENSTNIG00000011331 I 0.763
ENSAMXG00000011538 Astyanax mexicanus ENSAMXG00000011538 I 0.762
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.762
ENSLOCG00000001067 Lepisosteus oculatus ENSLOCG00000001067 I 0.762
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.755
ENSGMOG00000011950 Gadus morhua ENSGMOG00000011950 I 0.753
ENSCAFG00000018271 Canis familiaris ENSCAFG00000018271 I 0.748
ENSONIG00000012010 Oreochromis niloticus ENSONIG00000012010 I 0.748
ENSPFOG00000003362 Poecilia formosa ENSPFOG00000003362 I 0.743
SFPQ Anolis carolinensis ENSACAG00000013307 I 0.741
ENSLOCG00000014739 Lepisosteus oculatus ENSLOCG00000014739 I 0.741
SFPQ Pteropus vampyrus ENSPVAG00000001865 I 0.741
ENSPFOG00000003127 Poecilia formosa ENSPFOG00000003127 I 0.736
ENSXMAG00000016391 Xiphophorus maculatus ENSXMAG00000016391 I 0.736
sfpq Oryzias latipes ENSORLG00000007459 I 0.735
ENSPMAG00000005583 Petromyzon marinus ENSPMAG00000005583 I 0.735
ENSLACG00000014728 Latimeria chalumnae ENSLACG00000014728 I 0.732
ENSXMAG00000007929 Xiphophorus maculatus ENSXMAG00000007929 I 0.730
ENSAMXG00000006846 Astyanax mexicanus ENSAMXG00000006846 I 0.728
nono Danio rerio ENSDARG00000020482 I 0.728
ENSONIG00000017737 Oreochromis niloticus ENSONIG00000017737 I 0.728
ENSGMOG00000011957 Gadus morhua ENSGMOG00000011957 I 0.724
ENSTSYG00000009311 Tarsius syrichta ENSTSYG00000009311 I 0.721
nono Takifugu rubripes ENSTRUG00000005554 I 0.709
pspc1 Gasterosteus aculeatus ENSGACG00000014901 I 0.707
pspc1 Tetraodon nigroviridis ENSTNIG00000010358 I 0.701
pspc1 Takifugu rubripes ENSTRUG00000011335 I 0.701
ENSXMAG00000019883 Xiphophorus maculatus ENSXMAG00000019883 I 0.701