PSPC1 (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRMs_3D) IPR000504 ENSEEUG00000011288 T079768_2.00 Ensembl (2018-Dec-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID JPLE
e-dist
PSPC1
M10498_2.00		 Erinaceus europaeus NGURGKKK JPLE
Sasse et al.(2025)
RM_Eri.eur_ENSEEUG00000011288 		0.074

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M00809_2.00 		Homo sapiens UAGUG RNA-Bind-n-Seq
Dominguez et al.(2018)
0.755
SFPQ
M00808_2.00 		Homo sapiens WGUAAN RNA-Bind-n-Seq
Dominguez et al.(2018)
0.755
SFPQ
M00506_2.00 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
0.755
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
0.755
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Motifs from training set RBPs that strongly contributed to the reconstructed motif

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID e-dist (%
contribution)
SFPQ
M00190_2.00 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.074
(89.20%)

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000010290 RRM 69 146
ENSEEUP00000010290 RRM 143 208

RNA contacting residues

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

126 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSOARG00000014163 Ovis aries ENSOARG00000014163 I 1.000
PSPC1 Sus scrofa ENSSSCG00000009569 I 1.000
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 1.000
ENSBTAP00000005134-D1 Bos grunniens ENSBTAP00000005134-D1 I 1.000
PSPC1 Bos taurus ENSBTAG00000003934 I 1.000
Pspc1 Dipodomys ordii ENSDORG00000016050 I 1.000
PSPC1 Felis catus ENSFCAG00000027841 I 0.993
PSPC1 Homo sapiens ENSG00000121390 I 0.993
PSPC1 Gorilla gorilla ENSGGOG00000003414 I 0.993
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.993
ENSMEUG00000000476 Macropus eugenii ENSMEUG00000000476 I 0.993
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.993
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.993
PSPC1 Monodelphis domestica ENSMODG00000008029 I 0.993
ENSMPUG00000013347 Mustela putorius furo ENSMPUG00000013347 I 0.993
Pspc1 Mus musculus ENSMUSG00000021938 I 0.993
ENSNLEG00000001294 Nomascus leucogenys ENSNLEG00000001294 I 0.993
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.993
PSPC1 Otolemur garnettii ENSOGAG00000012643 I 0.993
ENSPANG00000001992 Papio anubis ENSPANG00000001992 I 0.993
ENSPPYG00000005186 Pongo abelii ENSPPYG00000005186 I 0.993
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.993
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.993
PSPC1 Sorex araneus ENSSARG00000000888 I 0.993
ENSSHAG00000004696 Sarcophilus harrisii ENSSHAG00000004696 I 0.993
ENSSTOG00000026833 Ictidomys tridecemlineatus ENSSTOG00000026833 I 0.993
ENSAMEG00000017420 Ailuropoda melanoleuca ENSAMEG00000017420 I 0.993
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.993
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.993
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.993
PSPC1 Dasypus novemcinctus ENSDNOG00000011078 I 0.993
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.986
ENSPSIG00000005168 Pelodiscus sinensis ENSPSIG00000005168 I 0.979
ENSFALG00000008750 Ficedula albicollis ENSFALG00000008750 I 0.959
PSPC1 Gallus gallus ENSGALG00000017142 I 0.959
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.959
Aan_R001274 Calypte anna Aan_R001274 I 0.959
Afo_R008576 Aptenodytes forsteri Afo_R008576 I 0.959
Brh_R000965 Buceros rhinoceros Brh_R000965 I 0.959
Ogr05221 Ophisaurus gracilis Ogr05221 I 0.959
Tal_R009732 Tyto alba Tal_R009732 I 0.959
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.959
Pvit_12920 Pogona vitticeps Pvit_12920 I 0.946
Alligator_sinensis_CCG002824.1 Alligator sinensis Alligator_sinensis_CCG002824.1 I 0.940
ENSLACG00000010762 Latimeria chalumnae ENSLACG00000010762 I 0.871
pspc1 Xenopus tropicalis XB-GENE-492866 I 0.871
ENSLOCG00000010832 Lepisosteus oculatus ENSLOCG00000010832 I 0.854
ENSCAFG00000007359 Canis familiaris ENSCAFG00000007359 I 0.848
ENSGMOG00000015074 Gadus morhua ENSGMOG00000015074 I 0.828
ENSAMXG00000015717 Astyanax mexicanus ENSAMXG00000015717 I 0.826
pspc1 Danio rerio ENSDARG00000006621 I 0.812
sfpq Takifugu rubripes ENSTRUG00000003783 I 0.769
SFPQ Gallus gallus ENSGALG00000002514 I 0.766
Alligator_sinensis_CCG014919.3 Alligator sinensis Alligator_sinensis_CCG014919.3 I 0.762
sfpq Xenopus tropicalis XB-GENE-5968416 I 0.762
SFPQ Echinops telfairi ENSETEG00000001095 I 0.755
ENSFCAG00000031287 Felis catus ENSFCAG00000031287 I 0.755
SFPQ Homo sapiens ENSG00000116560 D 0.755
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.755
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.755
ENSMICG00000011755 Microcebus murinus ENSMICG00000011755 I 0.755
Sfpq Mus musculus ENSMUSG00000028820 I 0.755
ENSNLEG00000010868 Nomascus leucogenys ENSNLEG00000010868 I 0.755
ENSOARG00000019439 Ovis aries ENSOARG00000019439 I 0.755
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.755
SFPQ Otolemur garnettii ENSOGAG00000027710 I 0.755
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.755
ENSPANG00000005380 Papio anubis ENSPANG00000005380 I 0.755
SFPQ Procavia capensis ENSPCAG00000006164 I 0.755
ENSPPYG00000001560 Pongo abelii ENSPPYG00000001560 I 0.755
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.755
Sfpq Rattus norvegicus ENSRNOG00000058461 I 0.755
ENSSTOG00000014004 Ictidomys tridecemlineatus ENSSTOG00000014004 I 0.755
ENSTGUG00000001722 Taeniopygia guttata ENSTGUG00000001722 I 0.755
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.755
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.755
Aan_R015520 Calypte anna Aan_R015520 I 0.755
Afo_R013931 Aptenodytes forsteri Afo_R013931 I 0.755
Brh_R010044 Buceros rhinoceros Brh_R010044 I 0.755
ENSP00000349748-D1 Bos grunniens ENSP00000349748-D1 I 0.755
Gfo_R008467 Geospiza fortis Gfo_R008467 I 0.755
Tal_R009770 Tyto alba Tal_R009770 I 0.755
ENSAMEG00000000815 Ailuropoda melanoleuca ENSAMEG00000000815 I 0.755
ENSAPLG00000003643 Anas platyrhynchos ENSAPLG00000003643 I 0.755
SFPQ Bos taurus ENSBTAG00000016328 I 0.755
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.755
ENSCJAG00000001431 Callithrix jacchus ENSCJAG00000001431 I 0.755
ENSCPOG00000015018 Cavia porcellus ENSCPOG00000015018 I 0.755
ENSCSAG00000001082 Chlorocebus sabaeus ENSCSAG00000001082 I 0.755
SFPQ Dasypus novemcinctus ENSDNOG00000049454 I 0.755
ENSECAG00000000642 Equus caballus ENSECAG00000000642 I 0.755
ENSCAFG00000018271 Canis familiaris ENSCAFG00000018271 I 0.753
ENSONIG00000012010 Oreochromis niloticus ENSONIG00000012010 I 0.750
sfpq Tetraodon nigroviridis ENSTNIG00000011331 I 0.750
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.748
ENSMLUG00000027090 Myotis lucifugus ENSMLUG00000027090 I 0.748
SFPQ Monodelphis domestica ENSMODG00000017937 I 0.748
ENSOANG00000011381 Ornithorhynchus anatinus ENSOANG00000011381 N 0.748
ENSSHAG00000016107 Sarcophilus harrisii ENSSHAG00000016107 I 0.748
Myotis_brandtii_SFPQ_10028873 Myotis brandtii Myotis_brandtii_SFPQ_10028873 I 0.748
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.748
ENSORLG00000004232 Oryzias latipes ENSORLG00000004232 I 0.747
sfpq Gasterosteus aculeatus ENSGACG00000002034 I 0.745
SFPQ Anolis carolinensis ENSACAG00000013307 I 0.745
Cmyd_10015354 Chelonia mydas Cmyd_10015354 I 0.741
Pvit_19348 Pogona vitticeps Pvit_19348 I 0.741
ENSAMXG00000011538 Astyanax mexicanus ENSAMXG00000011538 I 0.741
nono Danio rerio ENSDARG00000020482 I 0.736
ENSLOCG00000001067 Lepisosteus oculatus ENSLOCG00000001067 I 0.735
ENSPSIG00000011494 Pelodiscus sinensis ENSPSIG00000011494 I 0.735
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.735
ENSTSYG00000009311 Tarsius syrichta ENSTSYG00000009311 I 0.729
ENSGMOG00000011950 Gadus morhua ENSGMOG00000011950 I 0.727
ENSPFOG00000003127 Poecilia formosa ENSPFOG00000003127 I 0.723
ENSXMAG00000016391 Xiphophorus maculatus ENSXMAG00000016391 I 0.723
SFPQ Pteropus vampyrus ENSPVAG00000001865 I 0.721
ENSLOCG00000014739 Lepisosteus oculatus ENSLOCG00000014739 I 0.719
ENSPFOG00000003362 Poecilia formosa ENSPFOG00000003362 I 0.716
ENSONIG00000017737 Oreochromis niloticus ENSONIG00000017737 I 0.715
sfpq Oryzias latipes ENSORLG00000007459 I 0.709
pspc1 Gasterosteus aculeatus ENSGACG00000014901 I 0.708
ENSLACG00000014728 Latimeria chalumnae ENSLACG00000014728 I 0.705
ENSXMAG00000007929 Xiphophorus maculatus ENSXMAG00000007929 I 0.703
pspc1 Tetraodon nigroviridis ENSTNIG00000010358 I 0.701
pspc1 Takifugu rubripes ENSTRUG00000011335 I 0.701
ENSPMAG00000005583 Petromyzon marinus ENSPMAG00000005583 I 0.701