FMR1 (Oryzias latipes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSORLG00000009094 T19285_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.756
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.756
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000011409 KH 220 279
ENSORLP00000011409 KH 283 352

Links

Other KH family RBPs
Other Oryzias latipes RBPs

88 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAC59682 Xenopus laevis AAC59682 I 0.718
AAEL009326 Aedes aegypti AAEL009326 I 0.000
AAH43638 Xenopus laevis AAH43638 I 0.725
AAH73457 Xenopus laevis AAH73457 I 0.725
AAI31885 Xenopus laevis AAI31885 I 0.725
AAY79165 Xenopus laevis AAY79165 I 0.725
AAY79166 Xenopus laevis AAY79166 I 0.725
amel4_ncbi_hmm37854 Apis mellifera amel4_ncbi_hmm37854 I 0.000
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.756
CPIJ019402 Culex quinquefasciatus CPIJ019402 I 0.000
CpipJ_CPIJ019402 Culex pipiens CpipJ_CPIJ019402 I 0.000
DGIL_AUG5s14500g26t1 Acyrtosiphon pisum DGIL_AUG5s14500g26t1 N 0.000
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.733
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.756
FXR1 Canis familiaris ENSCAFG00000011582 I 0.756
FMR1 Canis familiaris ENSCAFG00000019085 I 0.847
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.756
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.756
fxr1 Danio rerio ENSDARG00000022968 I 0.733
FXR1 Equus caballus ENSECAG00000007560 I 0.756
FXR1 Erinaceus europaeus ENSEEUG00000006823 I 0.748
FXR1 Echinops telfairi ENSETEG00000006891 I 0.756
FXR1 Homo sapiens ENSG00000114416 D 0.756
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.748
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.756
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.756
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.748
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.756
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.756
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.756
Fxr1 Mus musculus ENSMUSG00000027680 I 0.748
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.756
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.756
FXR2 Oryzias latipes ENSORLG00000011571 I 0.740
FXR1 Oryzias latipes ENSORLG00000011787 I 0.725
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.756
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.756
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.763
FXR1 Sus scrofa ENSSSCG00000011769 I 0.748
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.748
FXR1 Tarsius syrichta ENSTSYG00000001610 I 0.740
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.756
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.756
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.733
estExt_fgenesh1_pg.C_690020 Daphnia pulex estExt_fgenesh1_pg.C_690020 N 0.000
e_gw1.377.37.1 Capitella teleta e_gw1.377.37.1 N 0.000
Fmr1 Drosophila melanogaster FBgn0028734 D 0.000
GF17134 Drosophila ananassae FBgn0094153 I 0.000
GG17303 Drosophila erecta FBgn0109530 I 0.000
GI24444 Drosophila mojavensis FBgn0147166 I 0.000
GM26187 Drosophila sechellia FBgn0181042 I 0.000
GD20735 Drosophila simulans FBgn0192201 I 0.000
GJ10720 Drosophila virilis FBgn0197997 I 0.000
GK12202 Drosophila willistoni FBgn0214213 I 0.000
GE24705 Drosophila yakuba FBgn0241810 I 0.000
nasonia_NCBI_hmm462784 Nasonia vitripennis nasonia_NCBI_hmm462784 I 0.000
P51115 Xenopus laevis P51115 I 0.725
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.725