SPEN (Bos taurus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSBTAG00000018729 T34900_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000024930 RRM 59 117
ENSBTAP00000024930 RRM 150 217
ENSBTAP00000024930 RRM 229 293
ENSBTAP00000049634 RRM 19 73
ENSBTAP00000053545 RRM 8 74
ENSBTAP00000053545 RRM 337 407
ENSBTAP00000053545 RRM 440 507
ENSBTAP00000053545 RRM 519 583

Links

Other RRM family RBPs
Other Bos taurus RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R009637 Ailuropoda melanoleuca Ame_R009637 N 0.926
SPEN Anolis carolinensis ENSACAG00000013761 N 0.900
SPEN Canis familiaris ENSCAFG00000016132 N 0.882
SPEN Callithrix jacchus ENSCJAG00000008527 N 1.000
SPEN Cavia porcellus ENSCPOG00000014036 N 0.882
spen Danio rerio ENSDARG00000074245 N 0.819
SPEN Danio rerio ENSDARG00000074332 N 0.882
LOC100053790 Equus caballus ENSECAG00000008833 N 0.926
SPEN Erinaceus europaeus ENSEEUG00000010255 N 0.863
SPEN Echinops telfairi ENSETEG00000016692 N 0.745
SPEN Homo sapiens ENSG00000065526 N 0.996
SPEN Gasterosteus aculeatus ENSGACG00000001176 N 0.889
SPEN Gasterosteus aculeatus ENSGACG00000005341 N 0.919
SPEN Gallus gallus ENSGALG00000003662 N 0.982
SPEN Gorilla gorilla ENSGGOG00000012041 N 0.996
SPEN Loxodonta africana ENSLAFG00000004524 N 0.923
SPEN Macropus eugenii ENSMEUG00000002422 N 0.745
SPEN Meleagris gallopavo ENSMGAG00000005180 N 0.982
SPEN Myotis lucifugus ENSMLUG00000010144 N 0.790
SPEN Macaca mulatta ENSMMUG00000008026 N 0.989
SPEN Monodelphis domestica ENSMODG00000003411 N 0.897
Spen Mus musculus ENSMUSG00000040761 N 0.993
SPEN Ornithorhynchus anatinus ENSOANG00000004165 N 0.794
SPEN Oryctolagus cuniculus ENSOCUG00000010840 N 0.878
SPEN Ochotona princeps ENSOPRG00000015800 N 0.915
SPEN Oryzias latipes ENSORLG00000018414 N 0.886
SPEN Oryzias latipes ENSORLG00000020159 N 0.843
SPEN Procavia capensis ENSPCAG00000009543 N 0.926
ENSPPYG00000001834 Pongo pygmaeus ENSPPYG00000001834 N 0.996
XR_024490.1 Pan troglodytes ENSPTRG00000000210 N 0.952
SPEN Pteropus vampyrus ENSPVAG00000013794 N 0.993
LOC690911 Rattus norvegicus ENSRNOG00000033556 N 0.989
SPEN Spermophilus tridecemlineatus ENSSTOG00000005637 N 0.863
SPEN Tupaia belangeri ENSTBEG00000003628 N 0.937
SPEN Taeniopygia guttata ENSTGUG00000002064 N 0.789
SPEN Tetraodon nigroviridis ENSTNIG00000010907 N 0.919
SPEN Tetraodon nigroviridis ENSTNIG00000014666 N 0.889
SPEN Takifugu rubripes ENSTRUG00000001017 N 0.923
SPEN Takifugu rubripes ENSTRUG00000011123 N 0.882
SPEN Tarsius syrichta ENSTSYG00000007170 N 0.908
SPEN Tursiops truncatus ENSTTRG00000015704 N 0.893