CPEB3 (Tarsius syrichta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTSYG00000003928 T42427_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CPEB4
M149_0.6 		Homo sapiens UUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00158 		0.701
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTSYP00000003588 RRM 442 478
ENSTSYP00000003588 RRM 551 618

Links

Other RRM family RBPs
Other Tarsius syrichta RBPs

109 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ADH10187 Xenopus laevis ADH10187 I 0.721
Ame_R003954 Ailuropoda melanoleuca Ame_R003954 I 0.743
Ame_R004097 Ailuropoda melanoleuca Ame_R004097 I 0.706
Ame_R004815 Ailuropoda melanoleuca Ame_R004815 I 0.721
CPEB3 Anolis carolinensis ENSACAG00000006335 I 0.743
ENSACAG00000012015 Anolis carolinensis ENSACAG00000012015 I 0.706
CPEB4 Anolis carolinensis ENSACAG00000015039 I 0.721
A7Z087_BOVIN Bos taurus ENSBTAG00000009995 I 0.721
CPEB3 Bos taurus ENSBTAG00000015450 I 0.743
CPEB2 Bos taurus ENSBTAG00000019847 I 0.706
CPEB3 Canis familiaris ENSCAFG00000007423 I 0.743
CPEB2 Canis familiaris ENSCAFG00000015372 I 0.706
CPEB4 Canis familiaris ENSCAFG00000016761 I 0.715
CPEB3 Choloepus hoffmanni ENSCHOG00000000272 I 0.737
CPEB2 Choloepus hoffmanni ENSCHOG00000003058 I 0.706
LOC100392612 Callithrix jacchus ENSCJAG00000008495 I 0.743
LOC100402805 Callithrix jacchus ENSCJAG00000012227 I 0.706
CPEB4 Callithrix jacchus ENSCJAG00000019166 I 0.721
CPEB2 Cavia porcellus ENSCPOG00000001180 I 0.706
CPEB4 Cavia porcellus ENSCPOG00000015530 I 0.721
cpeb3 Danio rerio ENSDARG00000060103 I 0.723
CPEB4 Danio rerio ENSDARG00000060495 I 0.713
CPEB2 Dasypus novemcinctus ENSDNOG00000016610 N 0.848
Cpeb2 Dipodomys ordii ENSDORG00000015311 I 0.706
CPEB3 Equus caballus ENSECAG00000000077 I 0.737
CPEB2 Equus caballus ENSECAG00000008722 I 0.706
LOC100058918 Equus caballus ENSECAG00000016921 I 0.721
CPEB4 Erinaceus europaeus ENSEEUG00000010887 I 0.721
CPEB3 Echinops telfairi ENSETEG00000000111 I 0.743
CPEB3 Homo sapiens ENSG00000107864 I 0.743
CPEB4 Homo sapiens ENSG00000113742 D 0.721
CPEB2 Homo sapiens ENSG00000137449 D 0.706
CPEB3 Gasterosteus aculeatus ENSGACG00000002944 I 0.715
CPEB4 Gasterosteus aculeatus ENSGACG00000018422 I 0.713
CPEB4 Gasterosteus aculeatus ENSGACG00000020430 I 0.713
CPEB3 Gallus gallus ENSGALG00000006912 I 0.743
CPEB4 Gallus gallus ENSGALG00000014074 I 0.710
CPEB2 Gallus gallus ENSGALG00000014516 I 0.706
CPEB2 Gorilla gorilla ENSGGOG00000004449 I 0.706
CPEB4 Gorilla gorilla ENSGGOG00000010097 I 0.721
CPEB3 Gorilla gorilla ENSGGOG00000016441 I 0.743
CPEB2 Loxodonta africana ENSLAFG00000007142 I 0.706
CPEB4 Loxodonta africana ENSLAFG00000016030 I 0.721
CPEB3 Loxodonta africana ENSLAFG00000018716 I 0.743
CPEB2 Macropus eugenii ENSMEUG00000008074 I 0.706
CPEB3 Macropus eugenii ENSMEUG00000009948 I 0.743
CPEB4 Meleagris gallopavo ENSMGAG00000003660 I 0.710
CPEB2 Meleagris gallopavo ENSMGAG00000005200 I 0.706
CPEB3 Meleagris gallopavo ENSMGAG00000009148 I 0.743
CPEB3 Microcebus murinus ENSMICG00000017842 I 0.743
CPEB3 Myotis lucifugus ENSMLUG00000009474 I 0.909
CPEB4 Myotis lucifugus ENSMLUG00000014640 I 0.721
CPEB2 Macaca mulatta ENSMMUG00000001384 I 0.706
CPEB3 Macaca mulatta ENSMMUG00000015050 I 0.743
CPEB4 Macaca mulatta ENSMMUG00000019926 I 0.721
CPEB2 Monodelphis domestica ENSMODG00000001149 I 0.706
CPEB4 Monodelphis domestica ENSMODG00000006036 I 0.721
CPEB3 Monodelphis domestica ENSMODG00000006673 I 0.743
Cpeb4 Mus musculus ENSMUSG00000020300 I 0.721
Cpeb3 Mus musculus ENSMUSG00000039652 I 0.743
Cpeb2 Mus musculus ENSMUSG00000039782 I 0.706
CPEB2 Ornithorhynchus anatinus ENSOANG00000003552 I 0.706
CPEB4 Ornithorhynchus anatinus ENSOANG00000003990 I 0.710
CPEB3 Ornithorhynchus anatinus ENSOANG00000015723 I 0.737
CPEB2 Oryctolagus cuniculus ENSOCUG00000007950 I 0.706
CPEB4 Oryctolagus cuniculus ENSOCUG00000008971 I 0.721
CPEB3 Oryctolagus cuniculus ENSOCUG00000010454 I 0.743
CPEB3 Otolemur garnettii ENSOGAG00000002002 I 0.881
CPEB4 Otolemur garnettii ENSOGAG00000004243 I 0.721
CPEB2 Otolemur garnettii ENSOGAG00000011237 I 0.706
CPEB4 Ochotona princeps ENSOPRG00000002868 I 0.721
CPEB3 Oryzias latipes ENSORLG00000000726 I 0.721
CPEB4 Oryzias latipes ENSORLG00000001711 I 0.713
CPEB4 Oryzias latipes ENSORLG00000007328 I 0.713
CPEB4 Procavia capensis ENSPCAG00000007021 I 0.721
CPEB3 Procavia capensis ENSPCAG00000012417 I 0.712
ENSPPYG00000002481 Pongo pygmaeus ENSPPYG00000002481 I 0.743
ENSPPYG00000014613 Pongo pygmaeus ENSPPYG00000014613 I 0.706
ENSPPYG00000016058 Pongo pygmaeus ENSPPYG00000016058 I 0.721
CPEB3 Pan troglodytes ENSPTRG00000002753 I 0.743
XR_025355.1 Pan troglodytes ENSPTRG00000015924 I 0.706
CPEB4 Pan troglodytes ENSPTRG00000017545 I 0.721
CPEB4 Pteropus vampyrus ENSPVAG00000007863 I 0.721
Cpeb3 Rattus norvegicus ENSRNOG00000020689 I 0.743
Cpeb4 Rattus norvegicus ENSRNOG00000033169 I 0.721
CPEB3 Sorex araneus ENSSARG00000001994 I 0.737
CPEB4 Sorex araneus ENSSARG00000013389 I 0.721
CPEB2 Sus scrofa ENSSSCG00000008736 I 0.706
CPEB3 Sus scrofa ENSSSCG00000010468 I 0.743
CPEB4 Spermophilus tridecemlineatus ENSSTOG00000006077 I 0.715
CPEB4 Tupaia belangeri ENSTBEG00000001429 I 0.721
CPEB3 Tupaia belangeri ENSTBEG00000013125 I 0.743
CPEB4 Taeniopygia guttata ENSTGUG00000000329 I 0.721
CPEB3 Taeniopygia guttata ENSTGUG00000008988 I 0.743
CPEB2 Taeniopygia guttata ENSTGUG00000009822 I 0.706
CPEB3 Tetraodon nigroviridis ENSTNIG00000004021 I 0.717
CPEB4 Tetraodon nigroviridis ENSTNIG00000017077 I 0.713
CPEB4 Tetraodon nigroviridis ENSTNIG00000018221 I 0.864
CPEB4 Takifugu rubripes ENSTRUG00000010692 I 0.713
CPEB4 Takifugu rubripes ENSTRUG00000010947 I 0.713
CPEB3 Takifugu rubripes ENSTRUG00000011309 I 0.717
CPEB4 Tarsius syrichta ENSTSYG00000003136 I 0.721
CPEB2 Tursiops truncatus ENSTTRG00000003940 I 0.706
CPEB3 Vicugna pacos ENSVPAG00000002144 I 0.909
cpeb3 Xenopus tropicalis ENSXETG00000012190 I 0.743
e_gw1.21.3.1 Lottia gigantea e_gw1.21.3.1 I 0.712
gw.572.2.1 Branchiostoma floridae gw.572.2.1 I 0.701
nasonia_NCBI_hmm338954 Nasonia vitripennis nasonia_NCBI_hmm338954 I 0.721
Sjc_0029950 Schistosoma japonicum Sjc_0029950 I 0.796