CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MKI67IP
(
Tursiops truncatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTTRG00000005849
T42577_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000005529
RRM
27
97
IYVGHLPPSLYETQIRAYFSQFGTVTRFRLSRSTKTGNSKGYGFVEFESEDVAKIAAETMNNYLFGERLLK
Links
Other
RRM
family RBPs
Other
Tursiops truncatus
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
29983.m003140
Ricinus communis
29983.m003140
N
0.000
91084
Helobdella robusta
91084
N
0.000
NCBP2_AEDAE
Aedes aegypti
AAEL006135
N
0.000
NCBP2_ANOGA
Anopheles gambiae
AGAP002547
N
0.000
amel4_ncbi_hmm3188
Apis mellifera
amel4_ncbi_hmm3188
N
0.000
Ame_R004608
Ailuropoda melanoleuca
Ame_R004608
N
0.000
CBP20
Arabidopsis thaliana
AT5G44200-TAIR-G
N
0.000
BGIBMGA007585
Bombyx mori
BGIBMGA007585
N
0.000
Bm1_02935
Brugia malayi
Bm1_02935
N
0.000
BRADI3G48560
Brachypodium distachyon
BRADI3G48560
N
0.000
cassava43646.valid.m1
Manihot esculenta
cassava43646.valid.m1
N
0.000
chr3.CM0160.780.nd
Lotus japonicus
chr3.CM0160.780.nd
N
0.000
Cucsa.174450
Cucumis sativus
Cucsa.174450
N
0.000
ncbp2
Dictyostelium discoideum
DDB_G0287197
N
0.000
EFA74823.1
Polysphondylium pallidum
EFA74823.1
N
0.000
NCBP2_BOVIN
Bos taurus
ENSBTAG00000008873
N
0.000
NCBP2
Canis familiaris
ENSCAFG00000013100
N
0.000
ENSCHOG00000005967
Choloepus hoffmanni
ENSCHOG00000005967
N
0.000
LOC100404338
Callithrix jacchus
ENSCJAG00000013735
N
0.000
NCBP2
Cavia porcellus
ENSCPOG00000002976
N
0.000
NCBP2
Equus caballus
ENSECAG00000016153
N
0.000
NCBP2
Homo sapiens
ENSG00000114503
N
0.000
NCBP2
Gallus gallus
ENSGALG00000006843
N
0.000
NCBP2
Loxodonta africana
ENSLAFG00000006372
N
0.000
ENSMEUG00000004730
Macropus eugenii
ENSMEUG00000004730
N
0.000
ENSMEUG00000008126
Macropus eugenii
ENSMEUG00000008126
N
0.000
ENSMGAG00000006728
Meleagris gallopavo
ENSMGAG00000006728
N
0.000
NCBP2
Microcebus murinus
ENSMICG00000003162
N
0.000
NCBP2
Myotis lucifugus
ENSMLUG00000017500
N
0.000
NCBP2
Macaca mulatta
ENSMMUG00000007825
N
0.000
XM_001373408.1
Monodelphis domestica
ENSMODG00000015908
N
0.000
XM_001371285.1
Monodelphis domestica
ENSMODG00000023276
N
0.000
XM_001367531.1
Monodelphis domestica
ENSMODG00000024607
N
0.000
LOC100020122
Monodelphis domestica
ENSMODG00000024608
N
0.000
Ncbp2
Mus musculus
ENSMUSG00000022774
N
0.000
NCBP2
Oryctolagus cuniculus
ENSOCUG00000006738
N
0.000
ENSOCUG00000014372
Oryctolagus cuniculus
ENSOCUG00000014372
N
0.000
NCBP2
Otolemur garnettii
ENSOGAG00000005009
N
0.000
ENSOPRG00000007634
Ochotona princeps
ENSOPRG00000007634
N
0.000
NCBP2
Procavia capensis
ENSPCAG00000003219
N
0.000
ENSPPYG00000014449
Pongo pygmaeus
ENSPPYG00000014449
N
0.000
NCBP2
Pan troglodytes
ENSPTRG00000015789
N
0.000
NCBP2
Pteropus vampyrus
ENSPVAG00000017273
N
0.000
Pigz
Rattus norvegicus
ENSRNOG00000001746
N
0.000
ENSSSCG00000011835
Sus scrofa
ENSSSCG00000011835
N
0.000
ENSSSCG00000011840
Sus scrofa
ENSSSCG00000011840
N
0.000
ENSSTOG00000001584
Spermophilus tridecemlineatus
ENSSTOG00000001584
N
0.000
NCBP2
Tupaia belangeri
ENSTBEG00000015222
N
0.000
NCBP2
Tursiops truncatus
ENSTTRG00000013908
N
0.000
NCBP2
Vicugna pacos
ENSVPAG00000010369
N
0.000
estExt_Genewise1.C_sca_180152
Lottia gigantea
estExt_Genewise1.C_sca_180152
N
0.000
estExt_gwp.C_920142
Nematostella vectensis
estExt_gwp.C_920142
N
0.000
e_gw1.10.746.1
Trichoderma virens
e_gw1.10.746.1
N
0.000
e_gw1.17.191.1
Trichoderma reesei
e_gw1.17.191.1
N
0.000
e_gw1.80.70.1
Selaginella moellendorfii
e_gw1.80.70.1
N
0.000
XM_002863560.1
Arabidopsis lyrata
fgenesh2_kg.8__389__AT5G44200.2
N
0.000
GID1.0044779
Dictyostelium purpureum
GID1.0044779
N
0.000
Glyma12g33400.1
Glycine max
Glyma12g33400.1
N
0.000
Glyma13g37030.1
Glycine max
Glyma13g37030.1
N
0.000
GRMZM2G034804
Zea mays
GRMZM2G034804
N
0.000
GSVIVG00020599001
Vitis vinifera
GSVIVG00020599001
N
0.000
gw1.11.372.1
Chlorella vulgaris
gw1.11.372.1
N
0.000
gw1.12.351.1
Coccomyxa C 169
gw1.12.351.1
N
0.000
gw1.29.143.1
Phycomyces blakesleeanus
gw1.29.143.1
N
0.000
NCBP2_IXOSC
Ixodes scapularis
ISCW017479
N
0.000
LOAG_03270
Loa loa
LOAG_03270
N
0.000
LOC_Os02g39890
Oryza sativa
LOC_Os02g39890
N
0.000
MDP0000315402
Malus x domestica
MDP0000315402
N
0.000
mgf009384m
Mimulus guttatus
mgf009384m
N
0.000
mgf009822m
Mimulus guttatus
mgf009822m
N
0.000
nasonia_NCBI_hmm134534
Nasonia vitripennis
nasonia_NCBI_hmm134534
N
0.000
nasonia_NCBI_hmm1532803
Nasonia vitripennis
nasonia_NCBI_hmm1532803
N
0.000
PDK_20s1327431g003
Phoenix dactylifera
PDK_20s1327431g003
N
0.000
PHUM535920
Pediculus humanus
PHUM535920
N
0.000
PK11911.1
Cannabis sativa
PK11911.1
N
0.000
A9PIB0_POPTR
Populus trichocarpa
POPTR_0007s01170
N
0.000
B9MYE5_POPTR
Populus trichocarpa
POPTR_0017s04640
N
0.000
ppa010346m
Prunus persica
ppa010346m
N
0.000
SB04G025800
Sorghum bicolor
Sb04g025800
N
0.000
SJAG_01064
Schizosaccharomyces japonicus
SJAG_01064
N
0.000
SPPG_00516
Spizellomyces punctatus
SPPG_00516
N
0.000
WUBG_16568
Wuchereria bancrofti
WUBG_16568
N
0.000