estExt_fgenesh1_pg.C_30395 (Batrachochytrium dendrobatidis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_30395 T50567_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_30395 RRM 51 121

Links

Other RRM family RBPs
Other Batrachochytrium dendrobatidis RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AGAP000977 Anopheles gambiae AGAP000977 N 0.732
Ame_R006638 Ailuropoda melanoleuca Ame_R006638 N 0.722
Aqu1.200557 Amphimedon queenslandica Aqu1.200557 N 0.704
Aqu1.228439 Amphimedon queenslandica Aqu1.228439 N 0.704
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.718
C30B5.4 Caenorhabditis elegans C30B5.4 N 0.704
An07g05140 Aspergillus niger CADANGAG00005786 N 0.704
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.704
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.704
CBG02589 Caenorhabditis briggsae CBG02589 N 0.718
CBN24057 Caenorhabditis brenneri CBN24057 N 0.718
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.718
CJA10629 Caenorhabditis japonica CJA10629 N 0.718
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.718
CRE26315 Caenorhabditis remanei CRE26315 N 0.746
LOC534630 Bos taurus ENSBTAG00000006252 N 0.704
RBMX2 Canis familiaris ENSCAFG00000018770 N 0.703
LOC100388331 Callithrix jacchus ENSCJAG00000002436 N 0.722
RBMX2 Cavia porcellus ENSCPOG00000006640 N 0.736
ENSCSAVG00000001047 Ciona savignyi ENSCSAVG00000001047 N 0.704
rbmx2 Danio rerio ENSDARG00000044380 N 0.718
LOC100058600 Equus caballus ENSECAG00000008257 N 0.722
RBMX2 Erinaceus europaeus ENSEEUG00000000839 N 0.708
RBMX2 Echinops telfairi ENSETEG00000001763 N 0.750
RBMX2 Homo sapiens ENSG00000134597 N 0.722
RBMX2 Gallus gallus ENSGALG00000004025 N 0.764
ENSGGOG00000016146 Gorilla gorilla ENSGGOG00000016146 N 0.708
RBMX2 Gorilla gorilla ENSGGOG00000023687 N 0.722
RBMX2 Loxodonta africana ENSLAFG00000017625 N 0.716
ENSLAFG00000028277 Loxodonta africana ENSLAFG00000028277 N 0.704
RBMX2 Macropus eugenii ENSMEUG00000010913 N 0.722
RBMX2 Meleagris gallopavo ENSMGAG00000001801 N 0.750
RBMX2 Microcebus murinus ENSMICG00000015139 N 0.722
ENSMLUG00000010298 Myotis lucifugus ENSMLUG00000010298 N 0.722
ENSMLUG00000017095 Myotis lucifugus ENSMLUG00000017095 N 0.732
RBMX2 Macaca mulatta ENSMMUG00000008389 N 0.722
XP_001110036.1 Macaca mulatta ENSMMUG00000020845 N 0.708
XM_001377711.1 Monodelphis domestica ENSMODG00000012002 N 0.708
ENSMODG00000019800 Monodelphis domestica ENSMODG00000019800 N 0.708
Rbmx2 Mus musculus ENSMUSG00000031107 N 0.736
RBMX2 Oryctolagus cuniculus ENSOCUG00000011809 N 0.740
ENSOGAG00000006237 Otolemur garnettii ENSOGAG00000006237 N 0.722
RBMX2 Oryzias latipes ENSORLG00000013183 N 0.704
RBMX2 Procavia capensis ENSPCAG00000012903 N 0.708
RBMX2 Pteropus vampyrus ENSPVAG00000004425 N 0.722
Rbmx2 Rattus norvegicus ENSRNOG00000007371 N 0.736
RBMX2 Sorex araneus ENSSARG00000007350 N 0.732
RBMX2 Spermophilus tridecemlineatus ENSSTOG00000015391 N 0.750
RBMX2 Tetraodon nigroviridis ENSTNIG00000007672 N 0.704
RBMX2 Takifugu rubripes ENSTRUG00000001699 N 0.718
RBMX2 Tursiops truncatus ENSTTRG00000016210 N 0.722
estExt_fgenesh1_pg.C_410012 Monosiga brevicollis estExt_fgenesh1_pg.C_410012 N 0.704
estExt_fgenesh2_pg.C_1800064 Branchiostoma floridae estExt_fgenesh2_pg.C_1800064 N 0.704
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.732
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.704
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.732
e_gw1.1.4685.1 Myceliophthora thermophila e_gw1.1.4685.1 N 0.761
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.732
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.704
e_gw1.18.2245.1 Nectria haematococca e_gw1.18.2245.1 N 0.718
e_gwW.26.138.1 Chlamydomonas reinhardtii e_gwW.26.138.1 N 0.704
GA10331-RA Drosophila pseudoobscura FBgn0070389 N 0.704
GF14433 Drosophila ananassae FBgn0091460 N 0.718
GI11259 Drosophila mojavensis FBgn0134020 N 0.718
GI11260 Drosophila mojavensis FBgn0134021 N 0.718
GI20215 Drosophila mojavensis FBgn0142951 N 0.718
GL26176 Drosophila persimilis FBgn0163758 N 0.704
GJ13600 Drosophila virilis FBgn0200822 N 0.704
GK14925 Drosophila willistoni FBgn0216930 N 0.746
fgenesh2_pg.C_sca_10000115 Lottia gigantea fgenesh2_pg.C_sca_10000115 N 0.775
FOXG_06071 Fusarium oxysporum FOXG_06071 N 0.704
FVEG_03939 Fusarium verticillioides FVEG_03939 N 0.704
GLRG_07641 Colletotrichum graminicola GLRG_07641 N 0.704
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.718
gw1.1.2440.1 Mucor circinelloides gw1.1.2440.1 N 0.704
gw1.1.3012.1 Tremella mesenterica gw1.1.3012.1 N 0.732
gw1.16.255.1 Trichoderma reesei gw1.16.255.1 N 0.704
gw1.4.1321.1 Pleurotus ostreatus gw1.4.1321.1 N 0.704
gw1.462.53.1 Capitella teleta gw1.462.53.1 N 0.732
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.718
nasonia_NCBI_hmm382923 Nasonia vitripennis nasonia_NCBI_hmm382923 N 0.746
NCU02467 Neurospora crassa NCU02467 N 0.732
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.732
Pa_1_22200 Podospora anserina Pa_1_22200 N 0.718
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.704
PHUM617480 Pediculus humanus PHUM617480 N 0.718
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.732
Sjc_0109550 Schistosoma japonicum Sjc_0109550 N 0.703
Smp_170230 Schistosoma mansoni Smp_170230 N 0.703
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.746
XP_002164481.1 Hydra magnipapillata XP_002164481.1 N 0.704