SPOG_01217 (Schizosaccharomyces cryophilus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SPOG_01217 T30735_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SPOG_01217T0 RRM 34 104

Links

Other RRM family RBPs
Other Schizosaccharomyces cryophilus RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.803
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.817
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.704
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.732
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.803
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.704
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.803
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.789
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.873
PHUM535920 Pediculus humanus PHUM535920 N 0.718
NCU00210 Neurospora crassa NCU00210 N 0.789
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.704
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.704
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.746
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.803
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.789
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.789
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.803
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.803
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.789
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.775
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.789
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.775
PredSwiss_CON682.3 Pneumocystis carinii PredSwiss_CON682.3 N 0.707
PredSwiss_ASS2010_2397.2 Pneumocystis carinii PredSwiss_ASS2010_2397.2 N 0.707
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.761
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.789
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.761
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.718
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.746
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.746
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.789
An12g03930 Aspergillus niger CADANGAG00009835 N 0.789
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.803
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.803
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.789
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.775
MCYG_04468 Microsporum canis MCYG_04468 N 0.789
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.803
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.789
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.789
FOXG_09405 Fusarium oxysporum FOXG_09405 N 0.722
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.789
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.803
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.803
CHGG_03355 Chaetomium globosum CHGG_03355 N 0.722
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.803
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.775
PGTG_01720 Puccinia graminis PGTG_01720 N 0.746
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.789
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.831
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.817
ACLA_080400 Aspergillus clavatus CADACLAG00007885 N 0.761
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.704
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.704
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.732
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.761
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.761
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.789
TERG_03424 Trichophyton rubrum TERG_03424 N 0.789
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.789
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.775
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.775
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.972
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.789
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.718