CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AGAP000977
(
Anopheles gambiae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AGAP000977
T32459_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP000977-PA
RRM
36
106
IFVGGLPYDLTEGDVLCVFSQYGEIVNVNLVRDKATGKSKGFAFICYEDQRSTVLAVDNLNGIKLVGKTLR
Links
Other
RRM
family RBPs
Other
Anopheles gambiae
RBPs
113 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.792
GL26176
Drosophila persimilis
FBgn0163758
N
0.775
GM17378
Drosophila sechellia
FBgn0172288
N
0.775
GD24233
Drosophila simulans
FBgn0195582
N
0.775
GJ13600
Drosophila virilis
FBgn0200822
N
0.775
GK14925
Drosophila willistoni
FBgn0216930
N
0.803
GE13281
Drosophila yakuba
FBgn0230967
N
0.775
ISCW009356
Ixodes scapularis
ISCW009356
N
0.704
PHUM617480
Pediculus humanus
PHUM617480
N
0.761
145168
Helobdella robusta
145168
N
0.732
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.803
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.817
e_gw1.98.15.1
Volvox carteri
e_gw1.98.15.1
N
0.761
GI20215
Drosophila mojavensis
FBgn0142951
N
0.761
GI11260
Drosophila mojavensis
FBgn0134021
N
0.761
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.789
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.806
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.775
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.761
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.746
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.778
CG10466
Drosophila melanogaster
FBgn0032822
N
0.775
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.775
GF14433
Drosophila ananassae
FBgn0091460
N
0.789
GG21207
Drosophila erecta
FBgn0113387
N
0.775
GH13830
Drosophila grimshawi
FBgn0121306
N
0.775
GI11259
Drosophila mojavensis
FBgn0134020
N
0.761
e_gwW.26.138.1
Chlamydomonas reinhardtii
e_gwW.26.138.1
N
0.704
estExtDG_fgenesh_newKGs_kg.C_2300001
Emiliania huxleyi
estExtDG_fgenesh_newKGs_kg.C_2300001
N
0.718
gw1.7.1053.1
Ostreococcus RCC809
gw1.7.1053.1
N
0.732
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.718
Sjc_0109550
Schistosoma japonicum
Sjc_0109550
N
0.770
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.778
estExt_fgenesh2_kg.C_140042
Agaricus bisporus
estExt_fgenesh2_kg.C_140042
N
0.732
estExt_fgenesh2_kg.C_42587
Serpula lacrymans
estExt_fgenesh2_kg.C_42587
N
0.704
gw1.4.2036.1
Heterobasidion annosum
gw1.4.2036.1
N
0.718
Pc22g16450
Penicillium chrysogenum
Pc22g16450
N
0.704
Smp_170230
Schistosoma mansoni
Smp_170230
N
0.770
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.817
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.817
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.817
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.803
gw1.39.43.1
Selaginella moellendorfii
gw1.39.43.1
N
0.704
estExtDG_fgenesh_newKGs_kg.C_80246
Emiliania huxleyi
estExtDG_fgenesh_newKGs_kg.C_80246
N
0.718
estExtDG_Genewise1.C_160043
Emiliania huxleyi
estExtDG_Genewise1.C_160043
N
0.718
estExt_fgenesh1_pg.C_30395
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_30395
N
0.732
estExt_fgenesh1_pg.C_410012
Monosiga brevicollis
estExt_fgenesh1_pg.C_410012
N
0.704
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.803
estExt_Genewise1Plus.C_10678
Schizophyllum commune
estExt_Genewise1Plus.C_10678
N
0.704
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.761
fgenesh1_pg.C_scaffold_53000041
Phytophthora ramorum
fgenesh1_pg.C_scaffold_53000041
N
0.704
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.845
gw1.1.2440.1
Mucor circinelloides
gw1.1.2440.1
N
0.732
gw1.1.945.1
Micromonas pusilla
gw1.1.945.1
N
0.761
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.775
AAH56844
Xenopus laevis
AAH56844
N
0.703
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.778
Bm1_02690
Brugia malayi
Bm1_02690
N
0.746
CBN24057
Caenorhabditis brenneri
CBN24057
N
0.718
CPIJ015641
Culex quinquefasciatus
CPIJ015641
N
0.770
CRE26315
Caenorhabditis remanei
CRE26315
N
0.718
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.792
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.746
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.718
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.757
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.778
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.792
ENSCSAVG00000001047
Ciona savignyi
ENSCSAVG00000001047
N
0.732
rbmx2
Danio rerio
ENSDARG00000044380
N
0.761
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.778
CBG02589
Caenorhabditis briggsae
CBG02589
N
0.704
ATEG_05773
Aspergillus terreus
CADATEAG00002943
N
0.718
CAOG_00327
Capsaspora owczarzaki
CAOG_00327
N
0.732
CC1G_01457
Coprinopsis cinerea
CC1G_01457
N
0.704
CIMG_06780
Coccidioides immitis
CIMG_06780
N
0.704
CpipJ_CPIJ015641
Culex pipiens
CpipJ_CPIJ015641
N
0.770
CPSG_07351
Coccidioides posadasii
CPSG_07351
N
0.704
PITG_06351
Phytophthora infestans
PITG_06351
N
0.704
SPRG_07125
Saprolegnia parasitica
SPRG_07125
N
0.718
UREG_03685
Uncinocarpus reesii
UREG_03685
N
0.704
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.746
DGIL_AUG5s13597g2t1
Acyrtosiphon pisum
DGIL_AUG5s13597g2t1
N
0.732
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.803
AAEL002461
Aedes aegypti
AAEL002461
N
0.831
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.750
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.778
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.778
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.778
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.764
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.806
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.757
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.767
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.770
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.778
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.722
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.845
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.722
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.736
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.778
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.789
RBMX2
Homo sapiens
ENSG00000134597
N
0.778
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.789
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.778
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.764
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.778
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.736
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.743
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.817
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.778
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.764
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.778
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.778
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.736