CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER2
(
Loxodonta africana
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSLAFG00000012508
T38045_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000010458
RRM
6
52
LLRDYELKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYFFRGKDLI
ENSLAFP00000010458
RRM
62
131
LCITNLPVSFTLEDFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGKQLGTSAL
ENSLAFP00000010458
RRM
151
221
LCIDKLPSDYRDSEELLHFFSSIHKPVFCQLAQDEGSYVGGFAVVEYTTAEHAEEVQQAADGMTIKGSKVQ
Links
Other
RRM
family RBPs
Other
Loxodonta africana
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER2
Bos taurus
ENSBTAG00000030686
N
0.863
Raver2
Mus musculus
ENSMUSG00000035275
N
0.805
RAVER2
Ornithorhynchus anatinus
ENSOANG00000008327
N
0.767
RAVER2
Oryctolagus cuniculus
ENSOCUG00000006221
N
0.796
RAVER2
Otolemur garnettii
ENSOGAG00000011157
N
0.852
ENSPPYG00000001271
Pongo pygmaeus
ENSPPYG00000001271
N
0.859
RAVER2
Pan troglodytes
ENSPTRG00000000824
N
0.863
RAVER2
Pteropus vampyrus
ENSPVAG00000007172
N
0.915
Raver2
Rattus norvegicus
ENSRNOG00000023812
N
0.815
RAVER2
Tupaia belangeri
ENSTBEG00000009004
N
0.910
RAVER2
Taeniopygia guttata
ENSTGUG00000009973
N
0.701
RAVER2
Tarsius syrichta
ENSTSYG00000006019
N
0.894
RAVER2
Monodelphis domestica
ENSMODG00000001242
N
0.795
RAVER2
Macaca mulatta
ENSMMUG00000018565
N
0.868
RAVER2
Canis familiaris
ENSCAFG00000018617
N
0.936
RAVER2
Choloepus hoffmanni
ENSCHOG00000007668
N
0.856
LOC100406727
Callithrix jacchus
ENSCJAG00000016724
N
0.852
RAVER2
Cavia porcellus
ENSCPOG00000005986
N
0.732
Raver2
Dipodomys ordii
ENSDORG00000002498
N
0.873
RAVER2
Equus caballus
ENSECAG00000022014
N
0.947
RAVER2
Homo sapiens
ENSG00000162437
N
0.849
RAVER2
Gallus gallus
ENSGALG00000011026
N
0.742
RAVER2
Gorilla gorilla
ENSGGOG00000016447
N
0.920
RAVER2
Macropus eugenii
ENSMEUG00000012740
N
0.723
RAVER2
Meleagris gallopavo
ENSMGAG00000011806
N
0.742
Ame_R013192
Ailuropoda melanoleuca
Ame_R013192
N
0.862