28644.m000904 (Ricinus communis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 28644.m000904 T48638_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
28644.m000904 RRM 47 117
28644.m000904 RRM 135 204
28644.m000904 RRM 226 294
28644.m000904 RRM 330 399

Links

Other RRM family RBPs
Other Ricinus communis RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK02172.1 Cannabis sativa PK02172.1 N 0.000
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.701
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.705
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.712
Glyma16g27670.1 Glycine max Glyma16g27670.1 N 0.726
Glyma20g31120.1 Glycine max Glyma20g31120.1 N 0.794
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.000
MDP0000156895 Malus x domestica MDP0000156895 N 0.000
MDP0000224417 Malus x domestica MDP0000224417 N 0.000
MDP0000253709 Malus x domestica MDP0000253709 N 0.000
MDP0000283985 Malus x domestica MDP0000283985 N 0.000
MDP0000286821 Malus x domestica MDP0000286821 N 0.726
MDP0000497543 Malus x domestica MDP0000497543 N 0.000
ppa002584m Prunus persica ppa002584m N 0.726
ppa002607m Prunus persica ppa002607m N 0.000
ppa002618m Prunus persica ppa002618m N 0.000
Glyma02g08480.1 Glycine max Glyma02g08480.1 N 0.744
Cucsa.364050 Cucumis sativus Cucsa.364050 N 0.757
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.000
GSVIVG00013699001 Vitis vinifera GSVIVG00013699001 N 0.744
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.701
B9GT62_POPTR Populus trichocarpa POPTR_0002s06340 N 0.779
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.000
B9H7X9_POPTR Populus trichocarpa POPTR_0005s22040 N 0.797
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.000
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.000
29801.m003152 Ricinus communis 29801.m003152 N 0.712
30170.m013847 Ricinus communis 30170.m013847 N 0.000
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.715
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.708
cassava31766.valid.m1 Manihot esculenta cassava31766.valid.m1 N 0.829
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.705
ppa002620m Prunus persica ppa002620m N 0.000