GRMZM2G157329 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G157329 T54166_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G157329_P01 RRM 96 165
GRMZM2G157329_P02 RRM 96 165
GRMZM2G157329_P03 RRM 48 117

Links

Other RRM family RBPs
Other Zea mays RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa014850m Prunus persica ppa014850m N 0.700
Glyma11g33670.1 Glycine max Glyma11g33670.1 N 0.700
Glyma11g15040.1 Glycine max Glyma11g15040.1 N 0.843
Glyma02g10380.1 Glycine max Glyma02g10380.1 N 0.714
fgeneshTA2_pg.C_scaffold_2000899 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_2000899 N 0.714
fgenesh1_pm.scaffold_57000010 Physcomitrella patens fgenesh1_pm.scaffold_57000010 N 0.829
estExt_fgenesh1_pg.C_3900014 Physcomitrella patens estExt_fgenesh1_pg.C_3900014 N 0.843
e_gw1.77.52.1 Physcomitrella patens e_gw1.77.52.1 N 0.843
e_gw1.4.224.1 Physcomitrella patens e_gw1.4.224.1 N 0.843
e_gw1.0.323.1 Selaginella moellendorfii e_gw1.0.323.1 N 0.757
Cucsa.213420 Cucumis sativus Cucsa.213420 N 0.786
Cucsa.172290 Cucumis sativus Cucsa.172290 N 0.857
Cucsa.137040 Cucumis sativus Cucsa.137040 N 0.714
cassava9473.m1 Manihot esculenta cassava9473.m1 N 0.729
cassava9472.m1 Manihot esculenta cassava9472.m1 N 0.729
cassava6599.valid.m1 Manihot esculenta cassava6599.valid.m1 N 0.771
Glyma12g07010.1 Glycine max Glyma12g07010.1 N 0.843
Glyma13g40930.1 Glycine max Glyma13g40930.1 N 0.843
ppa010358m Prunus persica ppa010358m N 0.857
MDP0000320467 Malus x domestica MDP0000320467 N 0.729
MDP0000251188 Malus x domestica MDP0000251188 N 0.829
MDP0000153894 Malus x domestica MDP0000153894 N 0.829
MDP0000119945 Malus x domestica MDP0000119945 N 0.829
LjT41B11.50.nd Lotus japonicus LjT41B11.50.nd N 0.757
Medtr4g078540 Medicago truncatula Medtr4g078540 N 0.871
GRMZM2G171921 Zea mays GRMZM2G171921 N 0.757
GRMZM2G166780 Zea mays GRMZM2G166780 N 0.957
mgf013964m Mimulus guttatus mgf013964m N 0.714
mgf010207m Mimulus guttatus mgf010207m N 0.843
mgf000319m Mimulus guttatus mgf000319m N 0.714
gw1.1.189.1 Selaginella moellendorfii gw1.1.189.1 N 0.743
Glyma18g04530.1 Glycine max Glyma18g04530.1 N 0.700
cassava6246.valid.m1 Manihot esculenta cassava6246.valid.m1 N 0.729
cassava6245.valid.m1 Manihot esculenta cassava6245.valid.m1 N 0.729
cassava37747.valid.m1 Manihot esculenta cassava37747.valid.m1 N 0.871
LOC_Os03g17010 Oryza sativa LOC_Os03g17010 N 0.900
GSVIVG00030785001 Vitis vinifera GSVIVG00030785001 N 0.700
GSVIVG00025009001 Vitis vinifera GSVIVG00025009001 N 0.886
GSVIVG00016588001 Vitis vinifera GSVIVG00016588001 N 0.757
XM_002864614.1 Arabidopsis lyrata fgenesh2_kg.8__1946__AT5G59950.1 N 0.771
XM_002873013.1 Arabidopsis lyrata fgenesh2_kg.6__165__AT5G02530.1 N 0.843
BRADI4G45380 Brachypodium distachyon BRADI4G45380 N 0.843
BRADI3G36320 Brachypodium distachyon BRADI3G36320 N 0.729
BRADI1G66430 Brachypodium distachyon BRADI1G66430 N 0.843
BGIOSIBCE027930 Oryza indica BGIOSIBCE027930 N 0.743
BGIOSIBCE010579 Oryza indica BGIOSIBCE010579 N 0.900
BGIOSIBCE007271 Oryza indica BGIOSIBCE007271 N 0.814
BGIOSIBCE007269 Oryza indica BGIOSIBCE007269 N 0.814
AT5G59950 Arabidopsis thaliana AT5G59950-TAIR-G N 0.771
AT5G02530 Arabidopsis thaliana AT5G02530-TAIR-G N 0.843
LOC_Os08g33120 Oryza sativa LOC_Os08g33120 N 0.743
LOC_Os11g01020 Oryza sativa LOC_Os11g01020 N 0.814
cassava37746.valid.m1 Manihot esculenta cassava37746.valid.m1 N 0.871
cassava35480.valid.m1 Manihot esculenta cassava35480.valid.m1 N 0.886
cassava30012.valid.m1 Manihot esculenta cassava30012.valid.m1 N 0.714
cassava30011.valid.m1 Manihot esculenta cassava30011.valid.m1 N 0.714
cassava30010.valid.m1 Manihot esculenta cassava30010.valid.m1 N 0.714
29876.m000260 Ricinus communis 29876.m000260 N 0.857
29585.m000588 Ricinus communis 29585.m000588 N 0.700
29005.m000257 Ricinus communis 29005.m000257 N 0.700
SB07G020860 Sorghum bicolor Sb07g020860 N 0.757
SB01G039330 Sorghum bicolor Sb01g039330 N 0.957
B9GUT0_POPTR Populus trichocarpa POPTR_0017s02890 N 0.700
B9NB27_POPTR Populus trichocarpa POPTR_0016s11470 N 0.843
B9HTL2_POPTR Populus trichocarpa POPTR_0010s21510 N 0.743
B9GER3_POPTR Populus trichocarpa POPTR_0001s24350 N 0.829
LOC_Os12g01010 Oryza sativa LOC_Os12g01010 N 0.843
PK16300.1 Cannabis sativa PK16300.1 N 0.700