BGIBMGA010431 (Bombyx mori)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIBMGA010431 T55031_0.6 SilkDB (2008-Apr-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.707
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA010431 RRM 19 87
BGIBMGA010431 RRM 290 360

Links

Other RRM family RBPs
Other Bombyx mori RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
bru-3 Drosophila melanogaster FBgn0262350 D 0.707
aret Drosophila melanogaster FBgn0000114 D 0.773
PHUM315130 Pediculus humanus PHUM315130 I 0.729
GF10965 Drosophila ananassae FBgn0088005 I 0.707
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.707
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.707
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.707
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.714
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.700
CELF6 Oryzias latipes ENSORLG00000013392 I 0.707
GG13757 Drosophila erecta FBgn0106020 I 0.707
GH14684 Drosophila grimshawi FBgn0122160 I 0.700
GI13095 Drosophila mojavensis FBgn0135852 I 0.700
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.850
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.700
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.771
GE20053 Drosophila yakuba FBgn0237378 I 0.707
GK17101 Drosophila willistoni FBgn0219100 I 0.707
GJ13842 Drosophila virilis FBgn0201061 I 0.700
GD12651 Drosophila simulans FBgn0184378 I 0.707
GM24582 Drosophila sechellia FBgn0179445 I 0.707
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.700
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.729
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.707
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.729
CPIJ016329 Culex quinquefasciatus CPIJ016329 I 0.879
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.700
AGAP004950 Anopheles gambiae AGAP004950 I 0.714
AAEL014033 Aedes aegypti AAEL014033 I 0.714
AAEL000695 Aedes aegypti AAEL000695 I 0.871
LOAG_05508 Loa loa LOAG_05508 I 0.729
CpipJ_CPIJ016329 Culex pipiens CpipJ_CPIJ016329 I 0.879
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.729
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.700
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.700
Celf6 Mus musculus ENSMUSG00000032297 I 0.700
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.707
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.729
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.702
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.714
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.700
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.707
GE18585 Drosophila yakuba FBgn0235992 N 0.821
DGIL_AUG5s6024g1t1 Acyrtosiphon pisum DGIL_AUG5s6024g1t1 N 0.718
AGAP009477 Anopheles gambiae AGAP009477 N 0.817
GL18622 Drosophila persimilis FBgn0156223 N 0.794
PHUM533900 Pediculus humanus PHUM533900 N 0.764
GA25731-RA Drosophila pseudoobscura FBgn0247108 N 0.821